Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0360 ATGGAAGAAAGAGAGAGTTGTTCGACGAATTCCACCATAACAACAAGCCCGGAGAAGCGCAAGCACCAGAGACAACACCACCCAGCATCCGTCAAACCATACAGAGGGATAAGGATGAGGAAGTGGGGTAAGTGGGTGGCCGAGATCAGAGAACCCAACAAAAGGTCACGGATTTGGCTGGGTTCTTACACCACGCCTGTCGCCGCCGCGCGGGCATACGACACCGCCGTCTTCTATCTTCGAGGCCCTTCCGCTCGCCTTAACTTCCCAGAATTGTTATTCCAAGACGACCACGGTTTCGTCCAGCCCCACAATATGTCCGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGCGCTAGGGTTGATGCCCTCCAAACCGCCCTTCAAGCCTCCTCCCAGTCCCCAACCACATCCGAGAAACCCGACTTGAATGAGTATCCAAAACCCGAAGACTCGGTTGAGGATTAA 471 0.5435 MEERESCSTNSTITTSPEKRKHQRQHHPASVKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDDHGFVQPHNMSADSIRKKATEVGARVDALQTALQASSQSPTTSEKPDLNEYPKPEDSVED 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0360 156 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 PRINTS Ethylene responsive element binding protein signature 72 92 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 153 - -
Glsi10g0360 156 FunFam Ethylene-responsive transcription factor 2 32 91 - -
Glsi10g0360 156 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Glsi10g0360 156 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 MobiDBLite consensus disorder prediction 126 142 - -
Glsi10g0360 156 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Glsi10g0360 156 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Glsi10g0360 156 MobiDBLite consensus disorder prediction 1 30 - -
Glsi10g0360 156 MobiDBLite consensus disorder prediction 122 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0360 Glsi-ChrGlsi10 2346845 2347315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0360 31 156 AP2-EREBP Transcription Factor Family AT2G23340 57.639 5.11e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi10g0360 AP2 2.4e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0360 10 2346845 2347315 Glsi10g0360 10 2346845 2347315 ECH