Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0359 ATGAAGGTGCATCAGTTCGCACGTGGACTCTGGGAGCATGAACCCTCCCTCTCTCTTGGCTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTCCCCAACACCACCCACACTACTCCTCTTCCTCCTTTCGATCTCAAGACCTTCATCCGCCCCGACAGTGGCCCTAGAAAATTCGTGTCCTCTGACGACATTAAGAAAGACTCGTCCCAGGTGGAAACGCATCCAGGTGGGACGCGATGGAATCCCACGCAAGAACAGATAGGCATATTGGAGATGCTGTACAGAGGTGGGATGCGAACTCCAAATGCTCATCAGATAGAGCAGATCACCGCCCAGCTTGGAAAGTATGGGAAGATCGAAGGGAAGAATGTGTTCTATTGGTTCCAAAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACAGTCTTGGCCTTACTCATAGTCCCAGAAATCCCGCTCCCGGCCCCATTATTACTACTATGACTTTGGACACAAGAGGGGAAATAGTAGAAACGGAGGAAGATAGTCCGTGCAAGAAGAAGTGCAGGAGCTGGACTTTGGAAGGCTTCCATGACCAAAGCATGTCATGTAAAGAGGAGGAACATACAACTCTGGAGCTTTTCCCATTGCATCCGGAAGGCAGATGA 651 0.5084 MKVHQFARGLWEHEPSLSLGCKRLRPLAPKLPNTTHTTPLPPFDLKTFIRPDSGPRKFVSSDDIKKDSSQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAHQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLTHSPRNPAPGPIITTMTLDTRGEIVETEEDSPCKKKCRSWTLEGFHDQSMSCKEEEHTTLELFPLHPEGR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0359 216 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 216 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Glsi10g0359 216 MobiDBLite consensus disorder prediction 136 157 - -
Glsi10g0359 216 ProSiteProfiles 'Homeobox' domain profile. 73 138 IPR001356 GO:0003677
Glsi10g0359 216 MobiDBLite consensus disorder prediction 59 82 - -
Glsi10g0359 216 FunFam WUSCHEL-related homeobox 4 77 144 - -
Glsi10g0359 216 SUPERFAMILY Homeodomain-like 73 143 IPR009057 -
Glsi10g0359 216 Pfam Homeodomain 78 137 IPR001356 GO:0003677
Glsi10g0359 216 SMART HOX_1 75 142 IPR001356 GO:0003677
Glsi10g0359 216 CDD homeodomain 78 139 IPR001356 GO:0003677
Glsi10g0359 216 Gene3D - 77 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0359 Glsi-ChrGlsi10 2333507 2334425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0359 1 167 Wox Gene Family AT1G46480 61.202 5.76e-64 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi10g0359 Homeodomain 8.1e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0359 10 2333507 2334425 Glsi10g0359 10 2333507 2334425 ECH