Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0342 ATGAACTTCGGTAATGGCCCTGGGGCCGACAACACCGGTGGTGGAAGGCCGCCGGGAAATTTTTCCCTGGCACGACAACCGTCCGTCTACTCTCTGACATTCGATGAGTTCGTGAGTACCATGGGAGGTTCAGGAAAGGACTTCGGGTCCATGAACATGGATGAGTTGCTGAAGAACATTTGGAGTGCTGAAGAGATTCAAACAATGGCGCCCATGAGTGGTGGTCAACAAGGGGGGAGTGCCCCTGGTGGGCATTTGCAGAGGCAGGGCTCCTTGACGTTGCCGCGGACACTTAGCCAGAAGACTGTCGATGAGGTTTGGAAGGATATTTCAAAGGATAATGGTGCGGGAAAGGAGGGGAATGGTACTGTGGCACTTAATTTGCCGCAGAGGCAGCAGACTTTGGGAGAGATGACGTTGGAGGAGTTCTTGGTGAGAGCCGGGGTTGTCAGAGAAGATACACAACCTGAACTGATTGGAAAGCCAAATGGTGGAGTTTTCGCCGATTTATCTCGTACTGGGAATAATAGTGGTTTGGGAATGGGTTTTCAGCAGTTGGGTAATGGTGCAGGCTTAATGGGCAACCGGATTCCTGGGAATAATGATCAACTAGCTCTCCAATCTCGCACCAATTTGCCGTTGAATGTTAACGGGGTTAGATCGAATCAGCAACAGCTACCGAATACACAGTCGCCGCAGCAGCAGATATTTCCTAAGCAACCTGCTATGCCTTTTGCAACGCAGATACCATTAACGAGCAACGCTCAGCTGGGTAATCAAGGAATCAGAGGTGGAACTGTGGGGCTTGCCAACCAGGGTCCGAATGGTAATCTGGTTCAGAGTACTGCACTGCAAGGTGGAGGAGGGATGGGTATCGTTGGTTTAGGACCTGGGGCTGTACACGTAGCTACAGGATCACCGGCTAATCAGGTGTCTTGCGATGAAATTGGAAAGAGTAATGGTGATACTTCGTCAGTGTCGCCTGTTCCTTATGTCTTTAATGGTGGTTTAAGAGGGAGGAGGAGCAGTGGGGCTGTGGAGAAGGTTATCGAGAGGAGGCAGAGAAGAATGATAAAGAATAGAGAGTCAGCTGCTAGGTCGCGGGCTCGTAAGCAGGCTTATACCATGGAATTGGAGACAGAAATTTCGAAGTTAAAAGAGGAGAACGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAGAAGAATCAAGTTATGGAGATGATGAATTTGCGAGGAGGAGTTAAGAAATTGTGCTTAAGACGAACACAAACAGGTCCTTGGTAA 1293 0.4927 MNFGNGPGADNTGGGRPPGNFSLARQPSVYSLTFDEFVSTMGGSGKDFGSMNMDELLKNIWSAEEIQTMAPMSGGQQGGSAPGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDNGAGKEGNGTVALNLPQRQQTLGEMTLEEFLVRAGVVREDTQPELIGKPNGGVFADLSRTGNNSGLGMGFQQLGNGAGLMGNRIPGNNDQLALQSRTNLPLNVNGVRSNQQQLPNTQSPQQQIFPKQPAMPFATQIPLTSNAQLGNQGIRGGTVGLANQGPNGNLVQSTALQGGGGMGIVGLGPGAVHVATGSPANQVSCDEIGKSNGDTSSVSPVPYVFNGGLRGRRSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELETEISKLKEENEELRRKQAEIMEMQKNQVMEMMNLRGGVKKLCLRRTQTGPW 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0342 430 SUPERFAMILY Leucine zipper domain 352 401 IPR046347 GO:0003700|GO:0006355
Glsi10g0342 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 350 401 IPR004827 GO:0003700|GO:0006355
Glsi10g0342 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 355 370 IPR004827 GO:0003700|GO:0006355
Glsi10g0342 430 CDD bZIP_plant_BZIP46 352 406 - -
Glsi10g0342 430 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 430 IPR043452 GO:0003700|GO:0045893
Glsi10g0342 430 Gene3D - 350 406 - -
Glsi10g0342 430 SMART brlzneu 348 412 IPR004827 GO:0003700|GO:0006355
Glsi10g0342 430 Pfam bZIP transcription factor 352 404 IPR004827 GO:0003700|GO:0006355
Glsi10g0342 430 Coils Coil 371 405 - -
Glsi10g0342 430 MobiDBLite consensus disorder prediction 1 24 - -
Glsi10g0342 430 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 350 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0342 Glsi-ChrGlsi10 2230756 2235022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0342 23 430 bZIP Transcription Factor Family AT4G34000 46.460 4.86e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0342 bZIP_1 1.4e-12 CL0018