Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0340 ATGGAAGGTTACGATAGAACTGTGAGTCTTGGAACTCTGAACTTGAAGTATGATCGGAGTGAATTTGATTCGGAGCCTGATGCATCCGTTTCTTCTCCGGTTACCAGGCAGAAGGCAGCTGCTGCCAAGCAGTTTATAGAGAATCATTATAAGAATTATCTTCAAGGATTGCAGGATCGTAAAGATAGACGTAGAGCACTTCAAAGGAGAGCACAAGAAGATCAAGTATCAATTGAAGAACAGGAGGAAATGCTGAGGAATCTGGAGCGCCGGGAAACTGAATATATGAGGATGCAAAGACGAAAAGTTGGAATGGATGACTTTGAGCAATTAACAGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGCTATGTCGTGCTAAAAGTACAGGAGAGATTTTTGCCATGAAGAAATTGAAGAAATCAGATATGCTTAGCCGTGGACAGGTAGAACATGTTCGGTCCGAGAGAAACTTGCTGGCAGAGGTTGATAGTCGATGCATTGTAAAACTCCATTACTCATTCCAAGATTCAGATTTCCTATATCTTATCATGGAGTATTTACCTGGTGGTGACATTATGACATTATTAATGCGAGAAGATATTCTTTCTGAAGATGTTGCCCGCTTCTACATTGCAGAAAGCATTCTAGCTATTCACTCGATACATCAACACAACTATGTACATAGGGATATAAAACCAGATAACCTGATACTGGATAGAAATGGCCATTTGAAGCTTTCAGACTTCGGCTTATGTAAGCCTCTTGATGATAAGTATTCAACAATGTTTTTGGGAAATGAAGATTTCATTCATGAATCAACTAGTGAAACTGAAGAATATTCTGCTTCTCCATGGTTGATGTCAAAAGAGCAATTCCTGCAGTGGAAACGTAATCGCCGTGCCTTGGCATATTCAACTGTTGGAACCCTTGATTATATGGCACCTGAAGTTTTGCTCAAAAAGGGCTATGGAATGGAATGTGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTATTGGCTATCCTCCCTTCTGTTCAGATGATCCAAGGATGACATGCCGTAAGATAATTAACTGGAAAACATGCCTGAAATTTCCTGAAGAACCCAAGATATCGGCTGAAGCTAAGGATCTGATCTGTTACTTACTGTGTGATGTTGACACAAGACTAGGGACTAGAGGAGTTGAAGAAATAAAGGCGCATCCATGGTTCAGATTTATTCAGTGGGACATGCTTTATGAAATGGAAGCTGCATATAAACCTGAAGTCACGGGAGACTTGGATACACAAAACTTTGAGAAGTTTCCTGAAGTAGAAGGTTCAACATCCTCAACAGCAACTGTGGGACCTTGGCGGAAGATGTTGACATCCAAAGACACCAATTTTATAGGATATACTTACAAGAAATCAGATCTTAAATCACTTGATGGTTCAGGTACAGATGTCAGATTAAAGGGATCCTCAAAAGGCCCTTCCCTAATTTCCTTACTAGGTCGGATTGACTTGCAAGAAACTGTCATTCCAGAAAGTGAGCAGAAGCCAGAAACTTGA 1560 0.4064 MEGYDRTVSLGTLNLKYDRSEFDSEPDASVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRRAQEDQVSIEEQEEMLRNLERRETEYMRMQRRKVGMDDFEQLTVIGKGAFGEVRLCRAKSTGEIFAMKKLKKSDMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDRNGHLKLSDFGLCKPLDDKYSTMFLGNEDFIHESTSETEEYSASPWLMSKEQFLQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMTCRKIINWKTCLKFPEEPKISAEAKDLICYLLCDVDTRLGTRGVEEIKAHPWFRFIQWDMLYEMEAAYKPEVTGDLDTQNFEKFPEVEGSTSSTATVGPWRKMLTSKDTNFIGYTYKKSDLKSLDGSGTDVRLKGSSKGPSLISLLGRIDLQETVIPESEQKPET 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0340 519 Gene3D Transferase(Phosphotransferase) domain 1 192 271 - -
Glsi10g0340 519 ProSiteProfiles Protein kinase domain profile. 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0340 519 Pfam Protein kinase domain 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0340 519 CDD MobB_NDR_LATS-like 42 103 - -
Glsi10g0340 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 444 - -
Glsi10g0340 519 Gene3D Transferase(Phosphotransferase) domain 1 306 425 - -
Glsi10g0340 519 CDD STKc_NDR_like 106 471 - -
Glsi10g0340 519 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Glsi10g0340 519 Coils Coil 64 101 - -
Glsi10g0340 519 SUPERFAMILY Protein kinase-like (PK-like) 83 459 IPR011009 -
Glsi10g0340 519 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi10g0340 519 FunFam Non-specific serine/threonine protein kinase 306 425 - -
Glsi10g0340 519 Pfam Protein kinase C terminal domain 426 470 IPR017892 GO:0004674|GO:0005524|GO:0006468
Glsi10g0340 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Glsi10g0340 519 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Glsi10g0340 519 Gene3D Phosphorylase Kinase; domain 1 77 191 - -
Glsi10g0340 519 SMART pkinase_C_6 408 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi10g0340 519 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Glsi10g0340 519 SMART serkin_6 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0340 519 Gene3D Phosphorylase Kinase; domain 1 426 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0340 Glsi-ChrGlsi10 2212195 2219575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0340 1 507 AGC Kinase Gene Family AT5G09890 76.172 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Glsi10g0340 Pkinase 1.6e-64 CL0016