Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0336 ATGGATGGAGAATTTGCTTACATCCTTTTGTTTCTGCTTCCCTTATTCTCATGCATCTTCTTATTCTTAAAGAAACAAAATAGAAAAACTCAGAGTCAGACAAGTGCAGAGCTTCCTCCAGGTTCAATGGGATGGCCGTACATAGGAGAAACTCTCCAACTGTACTCCCAGGACCCAAATGCTTTCTTTGCCGCCAAACAGAAAAGGTATGGTCAAATATTCAAGACCAATATCCTTGGCTGTCCGTGTGTCATGCTGGCTAGCCCTGAGGCTGCACGCTCTGTGCTCGTCACTCAAGCTCACTTGTTTAAGCCCACATATCCTAAAAGCAAGGAGCGCCTAATTGGCCCCTCTGCTCTGTTTTTCCACCAAGGCGACTACCATATGCGTTTAAGGAAGCTTATTCAGGGTTTCTTGTCCCTTGAAGCACTTCGCAAATTGGTGCCCCATATTGAAGCCTTGGCCGTTTCTGCCATGAATTCTTGGGGTGACGATCGCATCATTAACACATTTAATGAAATGAAAAGATTTTCTTTTGAAGTGGGTATCATCACAGTTTTCGGGCATCTGGAGCCCGGGTTGAGAGAAGAGCTAAAGAAGAACTACCGTATAGTAGACAGAGGCTACAATTCCTTTCCGACTACCCTCCCAGGAACACCATTCAAAAAGGCACTGCTGGCAAGAAAAAGAGTCGGCGATATTCTAAGAGATATAATTCGTGAGCGGAAGGAGAAGAGGTCACTTAAAAAAGATCTCTTGGGGTGCCTATTGAGCTGGAAAGATGAGAACGGGGAAGTCTTAAGCGATGACCAAATTTCAGATAACATAATTGGGGTGCTTTTTGCTGCTCAAGACACTACAGCTAGTGTGATGACATGGATAATAAAATACCTGCACGATGAGCCCAAACTTCTTGAGGCTGTAACGGCGGAACAGAAGGCTATTCACAAGGCAAATGATGACGGTAACCTACCACTGAGTTGGAATCAGACTAGAAGCATGCAAATTACTTACAAGGTTATATTAGAGAGCTTGAGAATGGCAAGCATTATATCATTCGCTTTCAGAGAAGCAGTGACTGACGTAGAGTACAAGGGATTCCTGATACCCAAAGGGTGGAAAGCTATGCCTCTGTTCAGAAACAATCATCATAATCCAGATTTTTTTCCCGATCCTCAGAAATTTAACCCTTCAAGGTTTGAGGTGGCACCAAAACCCAATACTTTCATGCCATTTGGTAGCGGAGTGCATGCCTGCCCCGGGAATGAGCTTGCTAAGCTGGAGATGCTGATTATGATCCACCACTTGGTCACTAAGTTTAGGTGGGAGGTGGTAGGATCACAACGTGGAATTCAGTATGGCCCATTTCCAGTGCCTATGAATGGACTCCCAGCAAGATTTTGGAGAGAATCTACCAGCTAG 1422 0.4466 MDGEFAYILLFLLPLFSCIFLFLKKQNRKTQSQTSAELPPGSMGWPYIGETLQLYSQDPNAFFAAKQKRYGQIFKTNILGCPCVMLASPEAARSVLVTQAHLFKPTYPKSKERLIGPSALFFHQGDYHMRLRKLIQGFLSLEALRKLVPHIEALAVSAMNSWGDDRIINTFNEMKRFSFEVGIITVFGHLEPGLREELKKNYRIVDRGYNSFPTTLPGTPFKKALLARKRVGDILRDIIRERKEKRSLKKDLLGCLLSWKDENGEVLSDDQISDNIIGVLFAAQDTTASVMTWIIKYLHDEPKLLEAVTAEQKAIHKANDDGNLPLSWNQTRSMQITYKVILESLRMASIISFAFREAVTDVEYKGFLIPKGWKAMPLFRNNHHNPDFFPDPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEMLIMIHHLVTKFRWEVVGSQRGIQYGPFPVPMNGLPARFWRESTS 473
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0336 473 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 Pfam Cytochrome P450 39 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 FunFam Abscisic acid 8 28 469 - -
Glsi10g0336 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Glsi10g0336 473 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 Gene3D Cytochrome P450 27 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0336 473 CDD CYP90-like 67 466 - -
Glsi10g0336 473 PANTHER CYTOCHROME P450 26 35 458 - -
Glsi10g0336 473 SUPERFAMILY Cytochrome P450 35 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi10g0336 Glsi-ChrGlsi10 2171412 2173995 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0336 6 471 Cytochrome P450 AT3G19270 65.665 0.0 662
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0336 10 2171412 2173995 Glsi10g0336 10 2171412 2173995 ECH