Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0330 ATGGCCTTAGCAATAGGAAGAAGCTTCCCTTTACAGCCATGCTCTTTATTCAAAAGTGCGAGACCTTCAGCGGGCGGGAGATTCTCGTGGCTCCGGCATGCCGGTGCTGAAATTACTCAACCTTGTGCGCGAACTTGTATTGCAGCCCAACAGCGACCTACGTGGCTGCCAGGGCTTGATCCTCCGCCTTATCTCGATGGAACTCTAGCTGGAGATTTTGGATTCGATCCACTTGGACTTGGAGAGGATCCTGAAAGCCTGAGGTGGTATGTGCAAGCAGAGTTAGTTCATGCTCGCTTTGCAATGATTGGAGTCTCAGGAATTCTACTGACAGATACACTTCGCGTTGCGGGACTTAAAACGATCCCAATTTGGTTTGAAGCCGGTGCAGTAAAATATGAGTTTGCCAGTACTGAGACACTGTTCATTGTCCAACTATTCTTGATGGGCTTTGTTGAAACAAAAAGGTATATGGATTTCGTTAGTCCTGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGATTGGAAGCTGCACTAGAAGGTTTAGAGCCGGGGTACCCTGGAGGTCCTTTGCTAAATCCCCTCGGCCTAGCTAAAGATATTAAAAACGCTCATGACTGGAAGCTTAAAGAGATTAAGAACGGGAGACTTGCAATGGTGGCAATGCTTGGCATCTTTGTGCAAGCTTCAGTGACTCATGTTGGACCAGTTGATAACCTTGTAGAGCATCTTTCCGATCCATGGCACAAAACTGTTATTCAGACGCTTGCCAGCTCTAATTAG 783 0.47 MALAIGRSFPLQPCSLFKSARPSAGGRFSWLRHAGAEITQPCARTCIAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMIGVSGILLTDTLRVAGLKTIPIWFEAGAVKYEFASTETLFIVQLFLMGFVETKRYMDFVSPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPVDNLVEHLSDPWHKTVIQTLASSN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0330 260 SUPERFAMILY Chlorophyll a-b binding protein 46 258 - -
Glsi10g0330 260 Gene3D Chlorophyll a/b binding protein domain 54 260 - -
Glsi10g0330 260 FunFam Chlorophyll a-b binding protein, chloroplastic 53 260 - -
Glsi10g0330 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 255 IPR001344 GO:0009765|GO:0016020
Glsi10g0330 260 Pfam Chlorophyll A-B binding protein 61 229 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0330 Glsi-ChrGlsi10 2147516 2148951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0330 38 253 Chloroplast and Mitochondria Gene Families AT3G61470 45.205 3.64e-60 189