Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0322 ATGTCTACCAGGAGTGAACACCAAACCGTCCCCCTTTCAGTGCTTCTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAATTCAGAAATTGTCCATGGTCAAGCCAGCCAGAGCAAAAAGGGTGAAGATTTCACGCTACTAAAGACGGAATGCCAAAGGGTGGTGGGAGATGGGGTGTCCACTTATTCTGTTTTTGCGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAATAATGTTTTAAGCGCAATTCCTGCAGACCTTAACAGAGATGAATGGGTAGCTGCGTTGCCAAGGGCTTTGGTTGCAGGCTTCGTCAAAACTGATAAAGATTTTCAAGAAAAAGCACAAAAATCGGGAACAACTGTAACCTTTGTGATTATAGAAGGATGGGTTGTTACAGTTGCATCTGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTAGAAAGCAACGAAGAGGAGAGGGTGCGTATTACTGCTAGTGGGGGTGAAGTTGGTCGGCTAAATACCGGTGGAGGTGCAGAGGTTGGTCCCTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCACGATCCATTGGTGATATGGATATTGGTGAATATATTGTCCCTGTACCTTATGTAAAGCAAGTGAAGCTGTCCACAGCTGGAGGCAGGCTTATTATCTGCAGTGACGGGGTTTGGGATGCTCTAACTGCAGAAATGGCCCTTGATTGTTGTCGTGGCATGTCAGCAGAGACTGCTGCATCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATCATCATTGATATATTACCTCAGGAGAAGCCACCTGCTCCTTTGCCGCAACCAAAGAAACCGGGAAAAGCAATGTTTAAGGCCATGTTTCGGAGAAAGTCCTCTGAATCATCGTCTTATACTGACAAAGAATACATGGAACCAGATGTGGTAGAGGAGCTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATACCCAATCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTTTGTCAAATAGAGGTGAAACCTGGGGAGGGTATTTCAATCCATGCAGGTGCCCCCAACCCAGGAAAATTGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAGAGAAGAAAGAAGCAATGGAAGGGAAAAGAACGTCAGATAGACTTAGCAGTGGAAGTGAATGA 1284 0.4502 MSTRSEHQTVPLSVLLKRELANEKIENSEIVHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHNGSAAAIYAKENLLNNVLSAIPADLNRDEWVAALPRALVAGFVKTDKDFQEKAQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLESNEEERVRITASGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEMALDCCRGMSAETAASHIVKEAVQAKGLRDDTTCIIIDILPQEKPPAPLPQPKKPGKAMFKAMFRRKSSESSSYTDKEYMEPDVVEELYEEGSAMLSERLDTKYPICNMFKLFMCAVCQIEVKPGEGISIHAGAPNPGKLRPWDGPFLCLSCQEKKEAMEGKRTSDRLSSGSE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0322 427 SMART PP2C_SIG_2 46 293 IPR001932 -
Glsi10g0322 427 Pfam Protein phosphatase 2C 53 278 IPR001932 -
Glsi10g0322 427 FunFam probable protein phosphatase 2C 12 32 299 - -
Glsi10g0322 427 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Glsi10g0322 427 Gene3D - 25 299 IPR036457 -
Glsi10g0322 427 SMART PP2C_4 21 291 IPR001932 -
Glsi10g0322 427 CDD PP2Cc 39 293 IPR001932 -
Glsi10g0322 427 ProSiteProfiles PPM-type phosphatase domain profile. 27 293 IPR001932 -
Glsi10g0322 427 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0322 Glsi-ChrGlsi10 2092111 2096522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0322 1 427 PP2C-type Phosphatase Gene Family AT1G47380 81.308 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0322 10 2092111 2096522 Glsi08g1886 08 13359929 13365488 CCT
Glsi10g0322 10 2092111 2096522 Glsi10g0322 10 2092111 2096522 ECH