Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0295 ATGGCGGTCACGGACTTCTTCGCGGGCGAAATCGCGACGGAACTACTGAAAATGCTGCTAAACATATCTCGCAAGTCTTTGCTATGCAAATCAAGTGCGGATCAGCTGGTAAGCTACATCCAGCAACTCCTGCCTACCATTGAAGAAATCAAATACTCTGGCGTTGAACTTCCCGCCGACCGCCAATCCCAGCTCGATCGCCTCTCTGTGATTCTGCGTTCTGGAGTCGAGCTATCCCACAAGGTTATTTCCTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTAGCCAAGAAAATGGAGAAGCTTGAGAAGCAAGTGTCCAGGTTCGTGCAAGGTCCCATGCAGGCTCATATCCTGGCTGATGTGCACCACACCAGGTTCGAAATGGCTGAGCGCTTCGACAGGGTAGAGGCATCCAACCGGCGGCTGGAGCAGTACTTCGGAGACATGAAAATTGGGGTGGGCGGCGGAGGGTGGGTGGAGGAGGCGGTGAGGAGTATGGAAGAGTATGACAAGTTTGATGCTAATTCAGGCAACTTGGGAGTGGGTTTGGATTTGGGGAAGAAGAAGGTGAAAGAGTTGACTGTTGGAAGGCAGGATTTGTGGGTTATTGGGATTTGTGGCATTGGGGGGTCAGGCAAGACCACTCTAGCCAGAGAGCTCTGCAGAGACGATCAAGTTCGAAGTTATTTCAAAGAGAGAATCTTGTTCCTGACAGTGTCACAATCTCCAAATGTGGAGCAGCTGAGAGCCAAAATTTGGGGATTTATCATGGGCAATGAAAATTTGTGTTCAAATTACGTGATTCCACAATGGAAGCCACAATTTGAATGCAGAAGTGAAGCACGAATCCTGATTGTTCTGGATGATGTGTGGTCACTCTCTGTGCTAGAGCAGCTTGTCTGTAGAATACCTGGGTGTAAATTCGTCGTAGTTTCAAGGTTCAAGTTCCCAACAATTTTTTCTGTCAGTCACGAAGTGGAATTATTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCCTTTGGACAAAAGTCAATTCCTGTTGCTGCTAATGAGAATTTGGTGATGCAGGTTGTGACTGAGTGTGGAAGACTTCCATTAGCTCTTAAAGTGATTGGAGCTTCATTACGAGATCAATCTGAGATGTTTTGGGTAGGTGTGAAAAACAGGCTATCCCAGGGCCAAAGTATAGGGGAATCTTATGAAATCAATCTTATTGAAAGAATGGCGATCAGTATCAATTACCTACCAGCGAAGATCAAGGAATGCTTCTTGGATCTGTGTTCTTTTCCGGAAGATAAGAAAATTCCTTTGGACGTTCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAGCTGAAGCTTTTGCTATTGTTATTGAGCTCTCAAACAAAAATCTTCTAACCTTGGTGAAAGAGGCACGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCTGTTACTCAACATGATGTACTGAGAGACCTTGCTCTTAATTTGAGCAATCGTGGGAGCATTAATGAACGCCGCCGGTTAGTTATGCCAAAAAGAGAAAACGGAGTCCCTAAAGAATGGTTGAGATATAAAGATCGACCATTTGAGGCTCAGATCGTTTCAGTTCACACTGGTGAAATGAAAGAAGCGGATTGGTTTAAAATGGAATTTCCCAAGGCTGAAGTGCTGATCATCAACTTCTCTTCTGATGAGTACTTCTTACCTCCCTTCATTGATAAAATGCCAAATTTGAGGGCATTAATATTGATAAACTATAGTGCATCATACGCATCCGTTCACAATCTTTGCGTTTTTAAGAATTTGGCATACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCCTCCCTCAGTTTTCAGAGTTTCCCTTGATAAACTTGCGCAAATTATTTGTAGTTTTGTGCAAGATAAATGACAATCTGGACGGGAAAGAGGCAGACCTGGCTCACATCTTCCCAAACCTCTTAGAGCTTACACTTGATCACTGTGATGATTTAACTAAGCTTCCCTCAAGCATTTGCAGAATGGAATCACTCCATAATCTTAGTCTCACAAACTGCCACAATCTAATCCAACTGCCTGATGACTTGGGCAAACTAGGATATCTGGAGATCCTGCGCTTATATGCTTGTCCAGCTCTGGAGGCACTTCCTGCTAGCGTCGGTGACCTTAGCAGGCTCAAGTACATTGACATCTCTCAATGTGTTAATCTGGCACGCTTCCCTCAAGAGATTGGTAAATTAGTGAACTTGGAGAAGATCGACATGAGGGAGTGCTCCTTGATTAAGAATTTACCAAAGTCTGCAGTGTTCTTGCAGTCACTGCGACTTGTCATTTGTGATGAGGAGGTATCTGGGATTTGGAAAGATGTGGAGAAGGCTAGGCCAAATGTCCATATTCAAGTATCAGAGCAGTGTTTTGATCTGGACTGGCTTAATGAGAAATAG 2475 0.4453 MAVTDFFAGEIATELLKMLLNISRKSLLCKSSADQLVSYIQQLLPTIEEIKYSGVELPADRQSQLDRLSVILRSGVELSHKVISSSRWNVYKNLQLAKKMEKLEKQVSRFVQGPMQAHILADVHHTRFEMAERFDRVEASNRRLEQYFGDMKIGVGGGGWVEEAVRSMEEYDKFDANSGNLGVGLDLGKKKVKELTVGRQDLWVIGICGIGGSGKTTLARELCRDDQVRSYFKERILFLTVSQSPNVEQLRAKIWGFIMGNENLCSNYVIPQWKPQFECRSEARILIVLDDVWSLSVLEQLVCRIPGCKFVVVSRFKFPTIFSVSHEVELLSEEDALSLFCHHAFGQKSIPVAANENLVMQVVTECGRLPLALKVIGASLRDQSEMFWVGVKNRLSQGQSIGESYEINLIERMAISINYLPAKIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDEAEAFAIVIELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRGSINERRRLVMPKRENGVPKEWLRYKDRPFEAQIVSVHTGEMKEADWFKMEFPKAEVLIINFSSDEYFLPPFIDKMPNLRALILINYSASYASVHNLCVFKNLAYLRSLWLEKVSLPQFSEFPLINLRKLFVVLCKINDNLDGKEADLAHIFPNLLELTLDHCDDLTKLPSSICRMESLHNLSLTNCHNLIQLPDDLGKLGYLEILRLYACPALEALPASVGDLSRLKYIDISQCVNLARFPQEIGKLVNLEKIDMRECSLIKNLPKSAVFLQSLRLVICDEEVSGIWKDVEKARPNVHIQVSEQCFDLDWLNEK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0295 824 PRINTS Disease resistance protein signature 366 380 - -
Glsi10g0295 824 PRINTS Disease resistance protein signature 279 293 - -
Glsi10g0295 824 PRINTS Disease resistance protein signature 731 747 - -
Glsi10g0295 824 PRINTS Disease resistance protein signature 204 219 - -
Glsi10g0295 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 431 IPR027417 -
Glsi10g0295 824 Gene3D - 330 410 IPR042197 -
Glsi10g0295 824 Gene3D - 182 320 IPR027417 -
Glsi10g0295 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Glsi10g0295 824 SUPERFAMILY L domain-like 563 786 - -
Glsi10g0295 824 Pfam NB-ARC domain 198 410 IPR002182 GO:0043531
Glsi10g0295 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 821 IPR039203 GO:0050832
Glsi10g0295 824 Gene3D - 411 502 IPR036388 -
Glsi10g0295 824 Gene3D Ribonuclease Inhibitor 542 813 IPR032675 -
Glsi10g0295 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0295 Glsi-ChrGlsi10 1931055 1934167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0295 201 779 WRKY Transcription Factor Family AT5G45050 23.461 2.10e-10 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0295 10 1931055 1934167 Glsi10g0295 10 1931055 1934167 ECH