Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0289 ATGTACGATGCTCCCCCAGCGTGCTTTTTGATTACCTTCCTCGATAATTTTGTCACTCTTGTATCGCACATCAGGCCTAATGATGTTTTGTATTCGAAGGTAAAAGGGTTCATCTACCCTCCTTTGCGGCTTTCTTTACAGTATGTTCGGAAATTGGAAGATTGCATTCTAATTCTATCTTTCCTTTTCATATCATCCTTCTCAAATGCTCTTTCTCACGCTAAAGCCTCCTTCATCGCTCGTCGCCAATTGTTAACTCTTCGTGAGAATGGAGATTTACCTCACAACTATGCAGATACCTATGAAACAGATCTAACGTTCCCCAATCATAGACTCAAACGTGCTTATATTGCACTTCAAGCTTGGAAAAAAGCTGTGTATTCAGACCCATTACATACCACAAACAATTGGGTGGGACCAGACGTTTGTTCTTACAATGGGGTTTTCTGTGCACCTGCTTTGGACAACCCACATCTCAACGTTGTGGCTGGGATTGATCTTAACCATGCAGACATTGCAGGTTTCATTCCTGTTGAGTTCGGTTTGTTGACTGACCTTGCTTTATTGCACGTAAACTCAAATAGATTTTGTGGGATTCTTCCAAAAAGCTTCTCTAAGTTAACGCTGTTGCATGAGCTAGATATCAGTAATAATCGCTTTGTTGGCCCATTCCCAGAGTGTATTCTACCAATTCCAGAAATCAAATATCTTGACCTCAGGTACAATAACTTCGAGGGCGCATTGCCTCCCGAGCTTTTCAATAAGAATCTTGATGCTATCTTTTTGAACAACAACCGATTCACATCCACAATTCCAGAAAACTTGGGAAATTCTCCAGCCTCTGTAGTGGTGTTGGCCAATAACCATTTGACGGGCTGCATTCCGAGAAGCATTGGTCAAATGGAAAAGACATTAAATGAGATTATTTTAATGAACAACAACATCACGGGATGCTTGCCTACAGAAATTGGAAGACTTGGCAGCGTGACAGTATTGGATGTAAGCGAAAACTTATTTGGCGGCATCTTGCCCAAGTCCCTCAATGGACTTAAAAAGGTAGAGGAGATATCTATTGCCCACAACAAGTTCACCGGTTTTGTCCCACAAAGCATATGCAGCTTACCAAGTTTAATGAATTTCACATTCCTCGATAACTATTTCAATGGTGAGGAACAAGGTTGTGCACCTAATTCTAGAAAGGACATTGCGTTGGATGATAATAGCAATTGCGTACCGAATAGGCCAAACCAGAAGGTGGCAAATGCTTGCACTGCTGTGATAAGCAAACCTATTGATTGTGGCAAGGCACAATGTGGCCATCCATCACTTCCCCACCCAAAACCTACGACTGAGAAGCCTACTCCATCTGTTTCAGAACCCCAACCTCCTACAGAAGAACCTCCTAAACTGCAACCCCAACCACCCACAGAGGAACTTCCAAAGCCACAGCCACCTAAAGAGCGATCTTTAAAACCCCAACCACCTAAAGAGGAACACCTTAAAACTCAACCACCTCAACAGCAACCCCCTCAACCACGACAAACACCTCAGCCACCAAAAGAGGAAGCTCCTAAGCAACAACCTCCCACAACCCAACCTCAACCGCTTAAGGAGGAACCACCAAAAGCTTCACCGCCTCAAGATGATCCACATAGGGAAATGCCTAAAAAACCACATAGGCCTCCTCGATCATTACCACCACCTCAAGTTCACTCTCCACCTCCTCCAGTCCATTCTCCACCACCCCTACCTGTTCACTCCCCACCACCTCATGTCCAGTCTCCTCCTCCAACACCAATTCACTCCCCACCACCTCCTGTCCAGTCTCCTCCATCCTCAGTTCACTCTTCACCACCTCTTGTCCTATCTCTTCCTCCACCACAAATACACTCCCCACCACCTCCTGTCCAGTCTCCTACTCCGCCACTAGTACCCTCCCCACCACCTCCGGTTCAGTCTCCTCCTCTGCCACTACTACACTCCCCACCACCTCTAATCCAATCTCCTCCTCTGCCACCAGTTCACTCTCCACCCCCACCTGTTCAGTCTCCTCCTCCTCCACCCCCAGTTCGCTCTTCGCCACCTTATGTTCAATCTCCTCCACCCCTAGTTCACTCTCCACCACCTCCTGTCCAATCTCCTCCGCCTCTAGTTAACTCTCTACCACCACCTGTTAAGTTTTCTCCACCCCTCGTACACTCCTTACCACCTCCTGTCCATTCTCCGCCCCCTTCAGTTCACTCCTCACCACCTTCAGTTCACTCTTCACCAGCTCCTGTCCATTCTCCTCCTCCTCCCCCAATATTCTCTCCACCTACACTAGTACACTCTCCTCCACCACCTGTTCAATCTTCGCCACCGCATTCTCCATCTCTTTCACCTCCTCCACAAGAAGATATCATTCTTCCCCCAATTTTTGGCGCTTCATACGCGTCGCCACCTCCTCCGGTCATCCCAGGATATTAA 2466 0.4696 MYDAPPACFLITFLDNFVTLVSHIRPNDVLYSKVKGFIYPPLRLSLQYVRKLEDCILILSFLFISSFSNALSHAKASFIARRQLLTLRENGDLPHNYADTYETDLTFPNHRLKRAYIALQAWKKAVYSDPLHTTNNWVGPDVCSYNGVFCAPALDNPHLNVVAGIDLNHADIAGFIPVEFGLLTDLALLHVNSNRFCGILPKSFSKLTLLHELDISNNRFVGPFPECILPIPEIKYLDLRYNNFEGALPPELFNKNLDAIFLNNNRFTSTIPENLGNSPASVVVLANNHLTGCIPRSIGQMEKTLNEIILMNNNITGCLPTEIGRLGSVTVLDVSENLFGGILPKSLNGLKKVEEISIAHNKFTGFVPQSICSLPSLMNFTFLDNYFNGEEQGCAPNSRKDIALDDNSNCVPNRPNQKVANACTAVISKPIDCGKAQCGHPSLPHPKPTTEKPTPSVSEPQPPTEEPPKLQPQPPTEELPKPQPPKERSLKPQPPKEEHLKTQPPQQQPPQPRQTPQPPKEEAPKQQPPTTQPQPLKEEPPKASPPQDDPHREMPKKPHRPPRSLPPPQVHSPPPPVHSPPPLPVHSPPPHVQSPPPTPIHSPPPPVQSPPSSVHSSPPLVLSLPPPQIHSPPPPVQSPTPPLVPSPPPPVQSPPLPLLHSPPPLIQSPPLPPVHSPPPPVQSPPPPPPVRSSPPYVQSPPPLVHSPPPPVQSPPPLVNSLPPPVKFSPPLVHSLPPPVHSPPPSVHSSPPSVHSSPAPVHSPPPPPIFSPPTLVHSPPPPVQSSPPHSPSLSPPPQEDIILPPIFGASYASPPPPVIPGY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0289 821 MobiDBLite consensus disorder prediction 620 801 - -
Glsi10g0289 821 MobiDBLite consensus disorder prediction 481 498 - -
Glsi10g0289 821 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Glsi10g0289 821 MobiDBLite consensus disorder prediction 561 613 - -
Glsi10g0289 821 FunFam Leucine-rich repeat extensin-like protein 1 116 277 - -
Glsi10g0289 821 SUPERFAMILY L domain-like 118 392 - -
Glsi10g0289 821 MobiDBLite consensus disorder prediction 542 560 - -
Glsi10g0289 821 Gene3D Ribonuclease Inhibitor 116 277 IPR032675 -
Glsi10g0289 821 Gene3D Ribonuclease Inhibitor 278 398 IPR032675 -
Glsi10g0289 821 MobiDBLite consensus disorder prediction 446 480 - -
Glsi10g0289 821 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 62 551 - -
Glsi10g0289 821 MobiDBLite consensus disorder prediction 438 821 - -
Glsi10g0289 821 MobiDBLite consensus disorder prediction 505 541 - -
Glsi10g0289 821 FunFam Leucine-rich repeat receptor protein kinase EMS1 278 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0289 Glsi-ChrGlsi10 1902463 1905483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0289 44 542 Trihelix Transcription Factor Family AT3G19020 51.964 0.0 550