Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0288 ATGGCTACAATGAGAGATATCCTTCAACTAGTTCATACAGAGTCCTTTGCCACCTCAGTTGCGTTGGGTGGTTTCTCTCTGTTGCTGTTCTTCTTCTTCCTGGGAAAATTGAACAGCTTTTTCATAAACAAACATTCTAAACTTCCGCCAGTACCAGTGGTTCCAGGGCTACCCCTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACGTTCACACAGTGGGCCGAGAAATATGGACCCATTTATTCCATCAGAACTGGTGCTTCCACACTCATTGTTCTCAACTCCGCCGATATTGCCAAGGAGGCAATGGTGACTAGATTTTCATCCATTTCAACAAGGAAGCTATCAAATGCCCTCAAGATTCTGACTTCTGACAAATGCATGGTTGCTACAAGTGACTACAACGAGTTTCACAAAATGGTCAAAAGGCATATTCTTACAAACGTTCTGGGAGCCAATGCACAGAAACGACACCGCTGCCACAGAGACGTCATGGTGGAAAACATTTCAAAGCAGTTGAACGAATATGTGAAGACCTCCCCTGATCAGGCTGTAAATTTCAGGAAAATATTTGTGTCTGAACTTTTTGGACTAGCGCTGAAGCAAGCTTTGGGAAACGTTGTAGATTCCATTTATGTGGAAGAGCTTGGGAGTACTTTATCAAGAGATGAAATATATGAGATTCTAGTGATTGACGTAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTCCCTTACTTGAAGTGGATACCAAATACAAGTATGGAGATGAAAATTCAGAGAATGTACTTCCGCAGAAAAGCAGTGATGAAGGCATTGATTAACGAGCAGAAGAAGCGAATGGCTTCTGGAAAGGAAGTAAATTGTTATATTGACTATCTGTTAAGCGAAGCAAAAGAACTGACAGAAGAACAAATTTACATGCTGCTTTGGGAGACCATTATTGAGACATCAGATACTACATTAGTGACTACAGAATGGGCTATCTATGAAATTGCTAAAGACGAGAATCGACAGGAACGTCTGTATGAGGAGCTCCAAAAAGTTTGTGGATATGAGAAGATCACAGAAGACCAATTATCTAAGCTACCATATTTAGGGGCTGTTTTCCATGAAACTTTAAGGAAGCATAGTCCGGCTCCAATTGTGCCGATAAGATACGCCCATGAAGATACCCAATTGGGAGGATATCACATTCCTGCTGGAAGCCAGATCGCAATAAATATATATGGATGTAACATGGATAAGAAGCGGTGGGAAGATCCTTACCAGTGGATGCCTGAGAGATTTCTTAATGAGAATTATGAACCCATGGATTTGTACAAGACGATGGCCTTTGGAGCAGGAAAGAGGGTGTGTGCAGGTTCTCTTCAAGCTATGTTAATAGCTTGCACAGCAATTGGCAGATTGGTTCAGGAATACGAGTGCAGGCTCAAAGAAGGGGAAGAAGAGAATGTGGATACAGTGGGCCTCACCACCCACAAGCGCTACCCCCTGCATGTGAAACTCAAGCCAAGAAATTAG 1545 0.4259 MATMRDILQLVHTESFATSVALGGFSLLLFFFFLGKLNSFFINKHSKLPPVPVVPGLPLIGNLLQLKEKKPYKTFTQWAEKYGPIYSIRTGASTLIVLNSADIAKEAMVTRFSSISTRKLSNALKILTSDKCMVATSDYNEFHKMVKRHILTNVLGANAQKRHRCHRDVMVENISKQLNEYVKTSPDQAVNFRKIFVSELFGLALKQALGNVVDSIYVEELGSTLSRDEIYEILVIDVMEGAIEVDWRDFFPYLKWIPNTSMEMKIQRMYFRRKAVMKALINEQKKRMASGKEVNCYIDYLLSEAKELTEEQIYMLLWETIIETSDTTLVTTEWAIYEIAKDENRQERLYEELQKVCGYEKITEDQLSKLPYLGAVFHETLRKHSPAPIVPIRYAHEDTQLGGYHIPAGSQIAINIYGCNMDKKRWEDPYQWMPERFLNENYEPMDLYKTMAFGAGKRVCAGSLQAMLIACTAIGRLVQEYECRLKEGEEENVDTVGLTTHKRYPLHVKLKPRN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0288 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Glsi10g0288 514 Pfam Cytochrome P450 54 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 16 514 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Glsi10g0288 514 CDD CYP77_89 81 507 - -
Glsi10g0288 514 FunFam Ent-kaurene oxidase 2 43 514 - -
Glsi10g0288 514 Gene3D Cytochrome P450 42 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0288 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0288 Glsi-ChrGlsi10 1899704 1902123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0288 46 513 Cytochrome P450 AT5G25900 68.443 0.0 682