Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0282 ATGTTCACTACCCCACACCCAGTAATTCGAACCTTGATGCCAGACCTGTCCTTAAACATTAGCCCACCAACTATTTCAGATTGTGAAGCCAAAGAGCTGGGAAGCTTCAATGGATTTACAAGCAAAACGCTTTACAGTGATATATGCTCAACCTCTGATTCCGGTAGCAGTGGAAGTGACTTAAGCCATGAAAATAGCTGTTTTCAGCCGGACGGGGTTTATAACCTTGGCCATCTTGAGCCCACGTTGAGCTTAGCCTTAGAAACCGCAGATTTCAATCCCCATCTTCTACAAGGACTCTCAAGAAACGTTAATCACTTCCACAACCACCAACCTCACATCTATGCCCGAGAGTTCAAACGAAATGGTGTGAAAAGAAGCATCAGAGCTCCTAGAATGAGATGGACCACAACCCTCCATGCCCAGTTTGTTCGTGCTGTTCAGCTCCTTGGTGGTCATGAAAGGGCAACTCCAAAGTCTGTATTAGAGTTGATGAATGTTAAGGACCTAACCTTAGCTCATGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTGACAAAGGTACAGGACCTACAGGTCATGGGCAGACAGATATGGGTTTGAGCCAAAGGGCAGGAACAGTCGATGTGCATGGAGTCTCGGCTTGTGAGAGAGCCGATTTGTTACCACACCCACTGCAAAACTCCCAGAGAGCATCATGGCAATCATCAACACAGACAAATGCAAACAATAGTAGACAACAACCCCAAACTGGTTTGGCGTATACTTACAATCTCAAGGCAAAGGAAACGATGGTGGATGGACAGAATGGAGGCCTGTCGAATTGCGTGAAGGAGAGGTTGGAATCTAGCTCTTTGTCACGTTCGGAGATGATGCTTGACCTAGAATTCACCCTTGGAAGACCCAGTTGGCAAACAGACCGTGCCGAATCTTCAACAGAGTTAACTTTTCTCAAGTGTTAA 972 0.4588 MFTTPHPVIRTLMPDLSLNISPPTISDCEAKELGSFNGFTSKTLYSDICSTSDSGSSGSDLSHENSCFQPDGVYNLGHLEPTLSLALETADFNPHLLQGLSRNVNHFHNHQPHIYAREFKRNGVKRSIRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGPTGHGQTDMGLSQRAGTVDVHGVSACERADLLPHPLQNSQRASWQSSTQTNANNSRQQPQTGLAYTYNLKAKETMVDGQNGGLSNCVKERLESSSLSRSEMMLDLEFTLGRPSWQTDRAESSTELTFLKC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0282 323 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 13 310 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi10g0282 323 FunFam Myb family transcription factor 129 187 - -
Glsi10g0282 323 SUPERFAMILY Homeodomain-like 128 185 IPR009057 -
Glsi10g0282 323 Pfam Myb-like DNA-binding domain 132 183 IPR001005 -
Glsi10g0282 323 MobiDBLite consensus disorder prediction 230 254 - -
Glsi10g0282 323 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 184 IPR006447 GO:0003677
Glsi10g0282 323 Gene3D - 130 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0282 Glsi-ChrGlsi10 1872990 1875480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0282 111 207 G2-like Transcription Factor Family AT5G42630 74.510 4.24e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi10g0282 Myb_DNA-binding 2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0282 10 1872990 1875480 Glsi10g0282 10 1872990 1875480 ECH