Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0280 ATGAGTATCACTTCCACAACTCCAGTTGCCATGGCTCCCATGCTTCAGTATCTAAATGTTGCCGGACTTATCGCCCTGCTCTTCATTTCTTACTATTTCTTGAAGAGGGATGCCCGGAAACCACCCGAAGCTGCGGGCGGATGGCCTCTGATCGGTCATCTTTCCCTCTTAGGTGCTTCTGCCCAGCCTCATATAACTCTGGCAGACTTGGCTGACAGGTACGGACCGATATTCAGCATCCGAATAGGGGTCCACCCAGCTGTCGTCGTGGCCAGTTGGGAGCTAGCCAAGGAGTGCTTCACCACCCATGATATCATAGTCTCCTCTCGTCCCAAGTTTACATCTTCAAAGGTCTTGGGATACGACTATGCTAATTTTGGATTCTCCCGTTATGGTGCTTTCTGGAGTGAAATGCGTAAGATTGCGGCTTCAGAGTTACTCTCCATTCGCCGCTTTGAAATGCTTCAAGATATCAGAGATTCTGAGGTACAGAGATCACTGAAAGATATATACAGAGTATGGAGCCACAAGAGAGACGCCTCCGGGAATGTGTTGGTGGATATGAACCGATGGTTAGGAGACACAAATCTGAATGTGATTCTGAGGATGATTGCTGGAAAGAGATACTCCGCCGATGATGCAGATGAGAAAGAGGTAAGGCGGTGCCGGAAGGTGTTCAGGGAGTTTTTTCGTTTGACGGGACAGTTTGTTCTGGGAGACGCAATTCCATTTCTTGGGTGGTTCGATTTGGGTGGTCATGTGAAGGACATGAAAAGGACAGCCAAAGAAATGGATATCATTACTTGTGAATGGTTAGAGGAACATCGCCAAAAAAGAGAACGCGGCGAGCCTAAAACAGAGCAGGACTTCATCGATGTCATGATGTCCGTCCTTGAACGGGCTGATCTTGCTGGTTATGATGCTGATACTGTCACCAAAGCCACCTGCACGACATTAATTGCGGGAGCAACAGATACCACAACAGTTACCATGGTGTGGGCACTATCGTTGCTGCTGAACAATCGTCATGCTTTGAAGAAAGTTGAAGATGAATTGCAGGCGCAGGTGGGGAAGGATAGAATGGTGAATGAATCGGATATAAACAAATTAGTGTACCTTCGAGCCGTAGTTAAAGAGACACTGAGATTATACCCAGCAGGACCGCTCTCAGGTCCGCGCGAATTCACAGAGGACTGCACCTTAGGGGGATACCATATACCAGCGGGTACCCGGTTGATTTTGAACCTGTGGAAGCTGCACAGAGACCCACGCGTATGGTCAGAGCCATTAGAGTTCAAACCGGAAAGATTCTTGACAACCCACAAGGATGTTGATGTGAAGGGTCAGCATTTTGAGCTAATTCCCTTCGGCGGCGGAAGAAGGGCGTGTCCTGGGATCTCATTTGGCCTTCAAATGACACACTTGGCTCTGGCTGCTTTGTTGCAAGCATTTGAGGTCACAACCCCTTCCAATTCCCCAGTTGATATGACCGCCACCTTCGGACTCACAAACATCAAAACTACCCCACTTGAGGTTTTACTCAAACCTCGCTTATCATCTTCTCTTTACCACTGA 1575 0.4825 MSITSTTPVAMAPMLQYLNVAGLIALLFISYYFLKRDARKPPEAAGGWPLIGHLSLLGASAQPHITLADLADRYGPIFSIRIGVHPAVVVASWELAKECFTTHDIIVSSRPKFTSSKVLGYDYANFGFSRYGAFWSEMRKIAASELLSIRRFEMLQDIRDSEVQRSLKDIYRVWSHKRDASGNVLVDMNRWLGDTNLNVILRMIAGKRYSADDADEKEVRRCRKVFREFFRLTGQFVLGDAIPFLGWFDLGGHVKDMKRTAKEMDIITCEWLEEHRQKRERGEPKTEQDFIDVMMSVLERADLAGYDADTVTKATCTTLIAGATDTTTVTMVWALSLLLNNRHALKKVEDELQAQVGKDRMVNESDINKLVYLRAVVKETLRLYPAGPLSGPREFTEDCTLGGYHIPAGTRLILNLWKLHRDPRVWSEPLEFKPERFLTTHKDVDVKGQHFELIPFGGGRRACPGISFGLQMTHLALAALLQAFEVTTPSNSPVDMTATFGLTNIKTTPLEVLLKPRLSSSLYH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0280 524 PANTHER CYTOCHROME P450 82C3-RELATED 25 523 - -
Glsi10g0280 524 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 CDD CYP82 75 517 - -
Glsi10g0280 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Glsi10g0280 524 SUPERFAMILY Cytochrome P450 47 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 FunFam Cytochrome P450 82C4 33 515 - -
Glsi10g0280 524 Gene3D Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0280 524 Pfam Cytochrome P450 46 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0280 Glsi-ChrGlsi10 1866294 1868010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0280 42 523 Cytochrome P450 AT4G31940 51.626 0.0 531