Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0278 ATGATCACTGAACACCCACTTCTCTTCCTCTTACCTCTATTTCTCCTTCCCCTCATCACACCCCAATCAATCCACCACAACTGCAGCCAAACATGCGCTTCACACCACTCCCATCAAAGCTTCCCCTACCCTTTTGGGTTCTCTTCCGGCTGCGCAATCCGCCTCGACTGTAAGCCCGACCGTGGAATCTTCATCGCTGAATACCCAGTCCAGGATATCAACCCAGATAGCATCATCGTCAGCGTCAAAGCTCGATGCAATCGTCCATTAGATAGCTTCCGCCGACTCTTCAGCCCCAAATACGCACCCACCTCACGAAACGCCATTCTTCTGCGAAATTGCAGCGGAACGGTCTTTCCCTGCGTCATACCGGCGACCATGGTGCAGACTCACTTTGAGTCCAAAAACTGCAGCTCCGGCAGTGGCAATTTGAGTTGCTATTACGAGAACACTACCCGGGGTTTTATGAGTTACGACAATTTAACACAAAGCCAGTGTAAATACCTTATGTCTTCCATAGCGGCAGAGGGTTTAAGGAATATTTCTTATACGGGTACAGTGGCGGCGGTGTCGTTCGAGGTTGAGACAATTGAGCTAGGATGGTGGCTTGAAGGAGAGTGCCAATGTTCTCGGGATGCCAACTGTACGATAATCGAGTCGCCGATTGATAAGAAGCCGGGGTATCGCTGCCGTTGCAAGGAAGGCTTCACTGGGGATGGATTTTTGGCCGGAAAGGGTTGCCGGAAAGCCTCTTCAGCATGCAACCCAGCGAAGTACATGTCCGGCCAATGTGGAGGAACAACCCGATTTGTTGTCTTAATTGGAGGAATTTTCTTTGGAGCTTCATTAATGATCGGTCTGGGTCTAATATGTTGTTTCTTTCGCCGGCCCTCCAAATTGAAAGTCACAAAGAGCACGAAAAGGCGCTTAACTGAAGCTACTAGTAATTACGGCGTTCCAATCTATACCTACAAAGACATTGAGAGAGCTACAAATAGCTTCTCAGAGGAACAAAGGCTTGGAACTGGGGCATATGGGACAGTTTATGCTGGAAAACTTCACAATGACGAATGGGTTGCCATCAAAAGGATCAAACATCGAGACACTGACAGTATTGAGAAAGTTATGAACGAGATCGAGCTCCTTTCCTCTGTGAGCCATCCCAACCTAGTTCGCTTGTTGGGTTGCTCTATAGAATATGGAGAACAAATCCTTGTCTACGAGTTCATGCCCAATGGAACATTAAGTCAACATCTGCAAAGGGAAAGAGGGAATGGACTTCCCTGGCCAGTTCGACTCACTATTGCCACTGAAACAGCACAAGCCATAGCACATCTTCACTCTGCCATTAATCCCCCGATATACCATAGAGATATCAAGTCAAGCAACATTCTGTTGGACTACAACTTTAGATCCAGAGTTGCAGATTTTGGTCTTTCTAGACTCGGGATGACTGAAATATCCCACATCTCAACTGCCCCACAAGGAACACCTGGGTACGTTGATCCACAATACCATCAAGACTTCCAACTTTCTGATAAAAGTGATGTATATAGCTTCGGTGTTGTTCTTGTTGAGATCATAACAGGATTGAAAGTGGTGGACTTTTCTCGTCCTCAGAATGCGGTAAATTTGGCTTCTTTTGCTACAGACAGGATTGGGAAGGGGCTTTTGGATGAGATTATAGACCCAATCCTCGAAGCAAATAGGGACGCTTGGACCCTTTCCTCTATACATAAGGTAGCTGAGCTAGCATTTCGATGCCTTGCATTTCACAGGGACATGAGACCTTCAATGATAGAAGTGGCAGCTGAGCTAGAGCAGATAAGGCTAAGTAGGTGGACAGCTTTCGAAGACATTAATCGTACAGCTTCAACAGAGTTGTCCTCTTGCTCTTTTTCTTCTAATGAAAGTGAGAAACCGTTAAGTATGACAGGAAAGAAGGTGGAGCTGGAGGGTAAAGGCCGTCTCAGGTTGGAGACTGAGGCTGTCACGTTAAACTCAATGGAAAGGCCGAAGAATAGTTCACCAGTTTCAGTGCAAGATCCAGATTTATGGTTGAGCGAACACAGCTCACCTTCGTCGAATAGTTTGATAAGTAAATCATTTGAGTGA 2115 0.4643 MITEHPLLFLLPLFLLPLITPQSIHHNCSQTCASHHSHQSFPYPFGFSSGCAIRLDCKPDRGIFIAEYPVQDINPDSIIVSVKARCNRPLDSFRRLFSPKYAPTSRNAILLRNCSGTVFPCVIPATMVQTHFESKNCSSGSGNLSCYYENTTRGFMSYDNLTQSQCKYLMSSIAAEGLRNISYTGTVAAVSFEVETIELGWWLEGECQCSRDANCTIIESPIDKKPGYRCRCKEGFTGDGFLAGKGCRKASSACNPAKYMSGQCGGTTRFVVLIGGIFFGASLMIGLGLICCFFRRPSKLKVTKSTKRRLTEATSNYGVPIYTYKDIERATNSFSEEQRLGTGAYGTVYAGKLHNDEWVAIKRIKHRDTDSIEKVMNEIELLSSVSHPNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQRERGNGLPWPVRLTIATETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFRSRVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFQLSDKSDVYSFGVVLVEIITGLKVVDFSRPQNAVNLASFATDRIGKGLLDEIIDPILEANRDAWTLSSIHKVAELAFRCLAFHRDMRPSMIEVAAELEQIRLSRWTAFEDINRTASTELSSCSFSSNESEKPLSMTGKKVELEGKGRLRLETEAVTLNSMERPKNSSPVSVQDPDLWLSEHSSPSSNSLISKSFE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0278 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 684 IPR044652 GO:0004672
Glsi10g0278 704 MobiDBLite consensus disorder prediction 667 704 - -
Glsi10g0278 704 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
Glsi10g0278 704 FunFam Wall-associated receptor kinase-like 20 410 619 - -
Glsi10g0278 704 Gene3D Phosphorylase Kinase; domain 1 296 409 - -
Glsi10g0278 704 SMART serkin_6 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0278 704 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Glsi10g0278 704 SUPERFAMILY Protein kinase-like (PK-like) 310 607 IPR011009 -
Glsi10g0278 704 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Glsi10g0278 704 ProSiteProfiles Protein kinase domain profile. 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0278 704 CDD STKc_IRAK 340 609 - -
Glsi10g0278 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Glsi10g0278 704 MobiDBLite consensus disorder prediction 663 704 - -
Glsi10g0278 704 Gene3D Laminin 207 242 - -
Glsi10g0278 704 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0278 Glsi-ChrGlsi10 1856707 1860194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0278 1 699 Receptor kinase-like Gene Family AT2G23450 50.776 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi10g0278 Pkinase 1.5e-41 CL0016