Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0276 ATGGCTTCCTATTCCTCTCCTTTTCTGCAACTGCAATTCCCACATCTAACAAAATCACCCAATCGCTCCTCCCCTCCATTCATCCTTCGTCCCACTTCCATCCGAGCCTCCGTCTCCCAGACACCGTCCTCCGTCCCCGTTCCGCCAGTGTCGGTGGCTGCTCACGAACCCCCCAATCTTCCCTTCCGCAAAATCCCCGGAGACTATGGTATCCCCATCATAGGTCCCTACAAAGACCGCCTTGACTATTTCTATAACCAAGGGCGCGATGACTACTTCAAATCACGAATCCATAAGTACCAGTCAACGGTGTTCCGGGCCAACATGCCCCCGGGTCCCTTCATTGCCCCCAACCCAAACGTCGTCGTGCTGCTCGACGGCAAAAGCTTCCCCGTCCTCTTTGATGTCACCAAGGTCGATAAGAAAGATCTCTTCACCGGCACTTTCATGCCTTCCACCGAACTCACCGGAGGCTACCGAGTTCTCTCTTACCTTGACCCGTCCGAGCCCAGACACGGTCAGCTCAAGCGCCTCATGTTCTTCCTCCTGAAGTCTCGTCGCGACACCGTCATCCCCGAGTTCCATTCTAGCTACACGGACCTCTTCGAGACCCTTGAAAACGAGCTCGCTGCCAAAGGAAAAGCTAATTTTGGAGATGCCAATGATCAAGCGGCGTTTAACTTTCTGGCTCGCACTCTTTATGGTTCCAACCCCGCCGACACCAAACTCGGATTGGATGGTCCGAAGTTAGTTCAGAAATGGGTGCTCTTCCAACTTAGTCCCATTCTGATTCTGGGCCTCCCCAAGCTGATCGAAGACTCTATATTCCACACCTTCCGGCTCCCTCCATTTTTGATCAAATCCGATTACCAGAGGTTGTACGATTTCTTTTACGAGTCCTCTGGATTCGTGCTTGAGGAAGCGGAGCGTCTGGGTGTGTCTAGAGAAGAAGCTTGCCACAACCTCTTATTCGCGACGTGCTTCAATTCATTTGGAGGAATGAAGATTTTCTTCCCCAACGTACTGAAGTGGATCGGTCGAGCAGGGGTGAAACTGCATACCCAGTTAGCGGAGGAGATCAGATCGGCGGTCAGATCGAACGGGGGCGAGGTGACGATGGCAGCCATGGAACAGATGCCGTTGATGAAGTCTGTGGTGTTCGAAGCTTTCCGGATAGATCCGCCGGTGGCGTCACAGTTCGGGAGAGCAAAGCGGGACTTAGTGATAGAGAACCACGATAACGCTTTTAAAGTGAAAGAAGGGGAGTTGTTATTCGGGTATCAGCCGTTCGCGACGAAGGATCCGAAGATATTCGAGAGAGCAGAAGAGTTCGTGGGGGATCGGTTCGTGGGGGAGGGTGAGAAATTGCTGAAGCACGTGCTGTGGTCGAATGGGCCAGAGACTGAAACTCCAACGGTTGGAAACAAACAATGTGTGGGCAAGGATTTCGTAACCTTGGTATCCAGACTGCTGGTAGTGGAGCTGTTTCTCCGTTATGATTCCTTTGAGATCCAAGTGGGAACGTCACCCTTAGGTTCTTCCATTACCATCACTTCTCTGAAGAGAGCTAGCTTTTAA 1578 0.5196 MASYSSPFLQLQFPHLTKSPNRSSPPFILRPTSIRASVSQTPSSVPVPPVSVAAHEPPNLPFRKIPGDYGIPIIGPYKDRLDYFYNQGRDDYFKSRIHKYQSTVFRANMPPGPFIAPNPNVVVLLDGKSFPVLFDVTKVDKKDLFTGTFMPSTELTGGYRVLSYLDPSEPRHGQLKRLMFFLLKSRRDTVIPEFHSSYTDLFETLENELAAKGKANFGDANDQAAFNFLARTLYGSNPADTKLGLDGPKLVQKWVLFQLSPILILGLPKLIEDSIFHTFRLPPFLIKSDYQRLYDFFYESSGFVLEEAERLGVSREEACHNLLFATCFNSFGGMKIFFPNVLKWIGRAGVKLHTQLAEEIRSAVRSNGGEVTMAAMEQMPLMKSVVFEAFRIDPPVASQFGRAKRDLVIENHDNAFKVKEGELLFGYQPFATKDPKIFERAEEFVGDRFVGEGEKLLKHVLWSNGPETETPTVGNKQCVGKDFVTLVSRLLVVELFLRYDSFEIQVGTSPLGSSITITSLKRASF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0276 525 PANTHER CYTOCHROME P450 26 60 499 - -
Glsi10g0276 525 SUPERFAMILY Cytochrome P450 61 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 Pfam Cytochrome P450 354 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 CDD CYP74 94 518 - -
Glsi10g0276 525 Gene3D Cytochrome P450 56 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 PRINTS E-class P450 group IV signature 478 496 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 PRINTS E-class P450 group IV signature 379 395 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0276 525 FunFam Allene oxide synthase, chloroplastic 60 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0276 Glsi-ChrGlsi10 1852839 1854416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0276 1 525 Cytochrome P450 AT5G42650 65.530 0.0 696