Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0267 ATGGTCTCCCGTCTCCAACAGTGTCTCAGCTTCCGGGAGCTATCACTGCAGTTGGAGGCGAACTTTTGTAAGCGAAGAGAACAACCTCAGCCTCCTTGCTTAATGGATGTGGAGCCAGATAAAATAAGTTGCTTACCAGGTCATGTTATAGACCAAATTTTGTCACATTTGTCAATTCAGGAAGCAGTAAGGACAAGTGTTTTATCTAGCAAGTGGAGGTACAAATGGGCCACGCTACCCAATCTTGTGTTTGATAACCAATGTCTCTCAATATCTTCCCAAGATAATTCAATTATTAAGAGCAAGCTTGCGAGAATCATTGATCACGTACTTTTGCTTCATTCTGGTTCAATCAACAAGTTCAAACTCTCTCATCGTGACCTCATTGGTGTAACTGACATTGATCGTTGGGCTCTTCATCTATCCAGAAGATCTATCAAAGAGTTTGTGCTGGAAATCTGGAAAGGGCAACGCTACAAGATACCCTCCTGTTTATTTACTTGCCAAAGTTTAAGTCACTTGGAGTTATTTAATTGTTGGCTTAAGCCTCCATTAACATTTCGAGGCTTTAGGAACTTGAAGAGTCTTGATCTTCAGCATGTTACCTTGGATCAAGATGTGTTTGAAAACTTGATTTCTAGCTGCCCGTTGCTCGAACGGTTGACATTGATGAACTTTGATGGTTTCACTCATCTTAACATTGATGCACCAAATCTTCAGTTTTTTGACATTGGAGGTAAATTTGAGGATGTGAGCTTTGAGAACACTTTCCATTTAGCTGTGGTATCCATTGGTTTGTATTTGAACTTTGAAAACGACAAAAGTAGATCGCAGGGAAGTTCTAGCAATTTGCTCAAGTTTTTTGTTCATCTACCTCACGTAAGAAGGCTAGAGGTTCAAAGCTATTTCTTAAAGTATCTGGCAGTAGGGATTGTGCCACTAAAGCTTCCTAGACCGTGCATTGATCTAAGTTATCTTTCCATACGCATAAACTTCAATGATTCAAAGGAAATTTCAGCTGCTTTGTGCCTTTTAAGAAGTTCTCCTAATCTGCTAGAAGCGGAAGTATTGGGTCGCCCCGAGGAACAAAAGACTCTTATGGGAACACAAGCCTACGGTTGGGAGGATGACTATTGGAACTGTCCGGTGATGCAACTGCGATTTGTGAGGATAGACGGCATCTCTGGTATCAAACCTGAAGTAGATTTTATCAGCTTTCTACTTTTATATTCTCCCGTGCTAGAGAGGATGACTGTGAAGCCTGCTTCTTCAAACGGAGGATTAGAGTTGATGAAAGAATTATTGCGGTTAAGGAGAGCCTCAGGACGAGCTGAAATTATATACTTGGATCCTTGA 1356 0.41 MVSRLQQCLSFRELSLQLEANFCKRREQPQPPCLMDVEPDKISCLPGHVIDQILSHLSIQEAVRTSVLSSKWRYKWATLPNLVFDNQCLSISSQDNSIIKSKLARIIDHVLLLHSGSINKFKLSHRDLIGVTDIDRWALHLSRRSIKEFVLEIWKGQRYKIPSCLFTCQSLSHLELFNCWLKPPLTFRGFRNLKSLDLQHVTLDQDVFENLISSCPLLERLTLMNFDGFTHLNIDAPNLQFFDIGGKFEDVSFENTFHLAVVSIGLYLNFENDKSRSQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGIVPLKLPRPCIDLSYLSIRINFNDSKEISAALCLLRSSPNLLEAEVLGRPEEQKTLMGTQAYGWEDDYWNCPVMQLRFVRIDGISGIKPEVDFISFLLLYSPVLERMTVKPASSNGGLELMKELLRLRRASGRAEIIYLDP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0267 451 Pfam Leucine Rich Repeat 192 216 IPR013101 -
Glsi10g0267 451 SMART 9598neu4hmm 380 449 IPR006566 -
Glsi10g0267 451 Gene3D Ribonuclease Inhibitor 137 349 IPR032675 -
Glsi10g0267 451 SUPERFAMILY F-box domain 39 118 IPR036047 GO:0005515
Glsi10g0267 451 PANTHER F-BOX PROTEIN-LIKE 40 423 - -
Glsi10g0267 451 ProSiteProfiles F-box domain profile. 39 73 IPR001810 GO:0005515
Glsi10g0267 451 SUPERFAMILY RNI-like 139 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0267 Glsi-ChrGlsi10 1802238 1805183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0267 34 272 EF-hand Containing Proteins AT5G41840 25.468 2.21e-12 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0267 10 1802238 1805183 Glsi10g0267 10 1802238 1805183 ECH