Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi10g0266 | ATGGGGAATCGACCTGGTAAAGGATTTTGCCGACGAAAAACGCGGTTGAAGAGAAACCCCATGGGTTTCGTTCATCACCAAGCTTCACCTTCTCACGTAGGGATAAGAACTGTGGGCGCCGACAATTTTTGTAACTTGTCCGCCAATTCAGATATCTGCATCTCTGTAGTGACTTGGAATATGAACGGCCAGGCTTCGTTTGAAGATCTGGCAGAAATGGTTGGGAGCAACTGTGAGTTCGATCTTCTAGTCATTGGCTTGCAAGAGGCTCCACGAAAAAGACTTGCAAAGCTGCTGCGAGCAGCTCTGCCTGGAACTCACATGCTGATAGGTAAAGTTATGATGCAATCTTTGCAGTTGTACCTATTTGGGCCCAAGAATGCAGGATCATTCATTAAAGAATTGAAGGTGGACAAACAGTCGGTTGGGGGGTGCGGAGGAATAATTGGAAGAAAGAAAGGGGCAGTAGCAATCTGGATTAACTACAAAGGCATACGGATGGTGTTCATCTCCTGCCATCTCTCTGCTCATGCTCGCAACGTAGAGGAAAGAAATTCAGAATGCAGGCACATATCGCACTCCCTCTTCTCCAGGAACTGGAACCCATATGCCAGACCATCCCAAATCACTGTTTGGTTGGGAGATCTAAATTACAGGCTACAGGGCATTGATACCTATCCAGCTAGAAATCTGATAGAGAGAGACCTGCACCGGCAGCTGCTTAGCAAAGATCAGCTCTTACAAGAGGCTGGAAGAGGGCAGATTTTCAATGGCTACTGCGAGGGGACATTGACATTCAAGCCAACCTACAAGTATAATGTTGGAAGCAACAATTATGATACAAGTTACAAGGTGCGGGTACCATCTTGGACGGATCGCATATTGTTCAAGATAGAAGATGCAGATAACATGGAAGCGACTTTACATTCCTACGAATCAATGGATGAAATAAACGGTTCGGATCATAAGCCAGTGAAGGCGCGCCTCTGCTTAAGACTTCGTAGAAATTTAAAATACTATGAACACATAGGAATCCACCTTATGGGTTGGCTTAGCAAAATTTTTAAAGGCTCCAACCATAAAATTTCGGAAGGGCATTACCATGCAGATTATAGAGAGGATACAGATTATTACGTACCATCAACTTCAGGGGATGTCTGGTCAGAAAATGAGAACGAAGATATAGATCGAGCTATTGCACTTTCTCTTGTAGAGGAAAATCGAAAGGGAAAGAAAATAAATGATTGCAATTCACATTTAGAAGAAGATGAACAACTTGCTAGAGCTATACAAGAAAGTCTAAATGTTGAGTCTCCTCCTAGATATGGAAATGGAAATATGTATCAACCTACTCCAGTGTATTTCCCAATGGGGTCCAGGATTTGTGCTGGTTGCAATACTGAGATTGGTTATGGACGATATCTAAATTGCTTGAATGCATTCTGGCATCCTGAATGCTTTCGCTGCCATGGTTGCAACCTGCCAATCTCTGATTATGAGTTCTCCACGTCTGGGAATTACCCTTATCATAAATCATGCTATAAGGAAAACTACCATCCAAAATGTGATGTATGCAATCACTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCTTTCTGGATCCAGAAATATTGCCCTGCTCATGAACATGATGGTACTCCCCGCTGTTGCAGTTGTGAGCGTATGGAGCCGCGAGAGACAGGATACATTGCTCTTAATGATGGCCGGAAGCTTTGCCTGGAGTGTCTGGACTCTGCTATCATGGATACTAGCGGATGCCAACCCCTTTATATAGACATACAAAAATTTTATGAAGGTCTACATATGAAACTGGACCAGCAAATTCCATTGCTCTTGGTCGAAAGACAAGCATTGAATGAAGCAAGAGAGGGGGAGAAGAATGGCCACTATCACATGCCCGAGACCAGGGGACTCTGCCTTTCTGAAGAACAGACTATCAGCACCATCTTAAGGCGACCTAGGTTTGGGACAGGAAATAGAGCAGTAGACATGAGAACACAACCCTACAAATTGACTCGACGCTGTGATGTGACGGCAATTCTCATTTTGTATGGTCTTCCAAGGTTGCTTACTGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTGCGACTTAAAGGTTATCGGACTCTCAGACAAGATGTTGAAGAAGGTATTTGTCAAGTTGTGGCTCATATGTGGTTGGAGTCTGAGCTCTCGTCTGCATCGGGCAGTGACTTCGCATCAGCCTCATCCTCGTCTGCATCCTATACATCTAGAAAAGGCAAAAGACCTCAGTTTGAGAGGAAGCTTGGGGAGTTCTTCAAGCACCAGATTGAATCAGACATTTCCCCTGTATATGGAGATGGATTTAGGGCAGGTCAACTAGCAGTTCGTAAGTATGGTCTACCAAGAACCCTTCAGCATATTTGGGTGACAGGGACTTTTCCCTTTTGA | 2475 | 0.442 | MGNRPGKGFCRRKTRLKRNPMGFVHHQASPSHVGIRTVGADNFCNLSANSDICISVVTWNMNGQASFEDLAEMVGSNCEFDLLVIGLQEAPRKRLAKLLRAALPGTHMLIGKVMMQSLQLYLFGPKNAGSFIKELKVDKQSVGGCGGIIGRKKGAVAIWINYKGIRMVFISCHLSAHARNVEERNSECRHISHSLFSRNWNPYARPSQITVWLGDLNYRLQGIDTYPARNLIERDLHRQLLSKDQLLQEAGRGQIFNGYCEGTLTFKPTYKYNVGSNNYDTSYKVRVPSWTDRILFKIEDADNMEATLHSYESMDEINGSDHKPVKARLCLRLRRNLKYYEHIGIHLMGWLSKIFKGSNHKISEGHYHADYREDTDYYVPSTSGDVWSENENEDIDRAIALSLVEENRKGKKINDCNSHLEEDEQLARAIQESLNVESPPRYGNGNMYQPTPVYFPMGSRICAGCNTEIGYGRYLNCLNAFWHPECFRCHGCNLPISDYEFSTSGNYPYHKSCYKENYHPKCDVCNHFIPTNPAGLIEYRAHPFWIQKYCPAHEHDGTPRCCSCERMEPRETGYIALNDGRKLCLECLDSAIMDTSGCQPLYIDIQKFYEGLHMKLDQQIPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQTISTILRRPRFGTGNRAVDMRTQPYKLTRRCDVTAILILYGLPRLLTGSILAHEMMHAWLRLKGYRTLRQDVEEGICQVVAHMWLESELSSASGSDFASASSSSASYTSRKGKRPQFERKLGEFFKHQIESDISPVYGDGFRAGQLAVRKYGLPRTLQHIWVTGTFPF | 824 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi10g0266 | 824 | SMART | i5p_5 | 50 | 337 | IPR000300 | GO:0016791|GO:0046856 | |
Glsi10g0266 | 824 | Pfam | LIM domain | 462 | 516 | IPR001781 | - | |
Glsi10g0266 | 824 | ProSiteProfiles | LIM domain profile. | 460 | 520 | IPR001781 | - | |
Glsi10g0266 | 824 | FunFam | Protein DA1-related 1 | 456 | 515 | - | - | |
Glsi10g0266 | 824 | MobiDBLite | consensus disorder prediction | 749 | 770 | - | - | |
Glsi10g0266 | 824 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 488 | 542 | - | - | |
Glsi10g0266 | 824 | FunFam | Type IV inositol polyphosphate 5-phosphatase 11 | 32 | 338 | - | - | |
Glsi10g0266 | 824 | Gene3D | Endonuclease/exonuclease/phosphatase | 34 | 346 | IPR036691 | - | |
Glsi10g0266 | 824 | Gene3D | Cysteine Rich Protein | 457 | 533 | - | - | |
Glsi10g0266 | 824 | MobiDBLite | consensus disorder prediction | 749 | 767 | - | - | |
Glsi10g0266 | 824 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 421 | 440 | IPR003903 | - | |
Glsi10g0266 | 824 | SUPERFAMILY | DNase I-like | 46 | 333 | IPR036691 | - | |
Glsi10g0266 | 824 | SMART | lim_4 | 461 | 513 | IPR001781 | - | |
Glsi10g0266 | 824 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 390 | 409 | IPR003903 | - | |
Glsi10g0266 | 824 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 454 | 487 | - | - | |
Glsi10g0266 | 824 | Pfam | Endonuclease/Exonuclease/phosphatase family | 57 | 322 | IPR005135 | GO:0003824 | |
Glsi10g0266 | 824 | SMART | uim | 390 | 409 | IPR003903 | - | |
Glsi10g0266 | 824 | SMART | uim | 421 | 440 | IPR003903 | - | |
Glsi10g0266 | 824 | ProSitePatterns | LIM zinc-binding domain signature. | 462 | 496 | IPR001781 | - | |
Glsi10g0266 | 824 | CDD | LIM_DA1 | 462 | 514 | - | - | |
Glsi10g0266 | 824 | Pfam | Protein DA1 | 611 | 818 | IPR022087 | - | |
Glsi10g0266 | 824 | PANTHER | PROTEIN DA1-RELATED 2 | 348 | 823 | IPR045218 | - | |
Glsi10g0266 | 824 | CDD | LIM | 489 | 564 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi10g0266 | Glsi-ChrGlsi10 | 1788315 | 1799235 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi10g0266 | 35 | 333 | Acyl Lipid Metabolism Gene Families | AT2G43900 | 27.174 | 2.35e-25 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Glsi10g0266 | Exo_endo_phos | 3.5e-07 | CL0530 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi10g0266 | 10 | 1788315 | 1799235 | Glsi10g0266 | 10 | 1788315 | 1799235 | ECH |