Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0260 ATGGAGGTGATGGTTCGGTGTACTTCCTGCAGTCTCTCCATATTTGATTGTACGCTTCGATTCGCCGTTGTTGTGTTCGGGATTGTGTTGATATTGGCATGGTCGGAGGCCACAAATGTAAATGCCCAAGACCACCAGCTTCAACGGGCAGGCCTGGAGAGGAGAAATGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAAAGGAAGCGACCTGGTCACAAGGTGTATTCAATTACTCCTCAGGTTTATGAACCTGGTCTCTCGGAAGCCCTTCAGCGTAAAGGTAGGGCATTACTTGGAGTGTCTACATCACCAGGGTCTCAAAAGGATGCAAAGCAACCTATTAGAATATATCTAAATTATGATGCCGTTGGTCACTCCCCTGAGAGAGATTGTCGAAAAGTTGGTGATATTGTCAAACTTGGAGAGCCTCCAATGACTTCCCCTTCTTGTAATTCTCATGGTGATCCTCCAACTTTGGGTGATTGTTGGTACAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACGTCGCCTTCACAAGGCATTGGGTCAGACAGCTAACTGGTTTAGGAGAGCATTAGCTGTCGAACCTGTCAAGGGGAACTTGCGTTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGAATATGTTGAGGAGGGTGTCTCTAATGCTGACTTGGTTCTCTTGGTGACTACAAGACCTACGACTGGGAATACACTTGCTTGGGCAGTGGCATGTGAAAGGGATCAATGGGGCCGTGCCATAGCTGGACATGTAAATGTTGCTCCTCGCCATTTGACAGCTGAGGCAGAGACTTTGCTGTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCTTTTGCTCATTTTAGAGATGAAAGGAAGAGACGGCGTGATCAGGTTACTAAACAAGTCGCGGATGAAAAGCTTGGGCGGATGGTAACTCGTGTCATGCTTCCTCGTGTTGTCATGCATTCACGATATCACTATGGGGCTTTCTCTGAAAATTTCACTGGTTTAGAGCTGGAAGATGGGGGAGGACGCGGTACCTCAGGATCTCACTGGGAAAAAAGGCTTTTGATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCCGTAGTTTCAAAAATGACACTTGCACTTTTAGAAGATAGTGGATGGTACCAAGCCAATTATAGCATGGCAGACCATCTTGATTGGGGTCGCAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGGGCCTATCATTGCAACACAACACAGTTGTCTGGTTGTACATATAACAGGGAGGCAGAGGGATACTGCCCAATTGTAACCTATAGTGGAGAACTGCCTCAATGGGCTCGATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTACTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACTGACACCAATAGTGCAAGAGCACCTGATAGAATGCTGGGTGAAGTCCGAGGGAGTAACTCTAGGTGTATGTCCTCGTCATTAGTACGCACAGGATTTGTACGGGGTTCTATGACCCAGGGAAATGGTTGTTATCAACACCGGTGTATCAATAATTCTTTAGAGGTTGCGGTGGATGGTACCTGGAAATTATGTCCTCAAGCTGGTGGACCTATTCTGTTCCCTGGCTTTAATGGTGAACTGGTCTGCCCTGCATATCATGAGCTCTGTAGCACAAACCCTGTCGCGGTACCTGGGCAATGTCCAAATGCTTGTAATTTCAATGGAGATTGTATTGATGGAAGGTGCCACTGCTTTCTAGGATTTCGTGGTCATGATTGCAGTAGGCGCTCCTGCCCTAGCAATTGCAATGGTAATGGCAAGTGCCTCTCCAATGGGATTTGTGAATGTAAAAAAGGGTATACTGGCATCGACTGTTCCACTGCTATTTGTGATGAGCAATGCAGCCTACATGGTGGGGTTTGTGATAACGGAGTTTGTGAATTCCGCTGTTCTGACTATGCTGGATATACATGCCAGAACAGCTCCTTGCTCCTCTCAAGTCTTTCAGTTTGCAAAAATGTTCTGGGAAGGGACATGTCTGGACAGCATTGTGCACCCAGTGAAACAAGTATACTCCAGCAGCTAGAAGATGTAGTTGTCATGCCCAATTACCACCGACTATTCCCTGGTGGTGCTAGGAAATTATTTAACATATTTGGCAGCACCTACTGTGATGAGGCTGCTAAACGACTAGCCTGCTGGATCTCAATCCAAAAGTGTGATAAGGATGGTGACAACAGGCTCCGAGTATGCCATTCAGCATGTCAGTCATATAATCTAGCATGTGGAGCCTCACTCGACTGCTCTGACCAAACCCTATTTAGTAGTGAAGGAGGTGAGGGTCAGTGTACTGGCTCTGGTGAGATGAAAATGTCGTGGTTTAATCGCCTGAGAAGTACTTTTTCTTTGAGAAATAGTTCCTTAAAAGGAATTTCTGTAAAATATAGGCACTATTAG 2568 0.4576 MEVMVRCTSCSLSIFDCTLRFAVVVFGIVLILAWSEATNVNAQDHQLQRAGLERRNENIASHSCIHDQILEQRKRPGHKVYSITPQVYEPGLSEALQRKGRALLGVSTSPGSQKDAKQPIRIYLNYDAVGHSPERDCRKVGDIVKLGEPPMTSPSCNSHGDPPTLGDCWYNCTSEDISGEDKKRRLHKALGQTANWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYVEEGVSNADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTKQVADEKLGRMVTRVMLPRVVMHSRYHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYQANYSMADHLDWGRNQGTEFVTSPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVTYSGELPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMSSSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGTWKLCPQAGGPILFPGFNGELVCPAYHELCSTNPVAVPGQCPNACNFNGDCIDGRCHCFLGFRGHDCSRRSCPSNCNGNGKCLSNGICECKKGYTGIDCSTAICDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSLLLSSLSVCKNVLGRDMSGQHCAPSETSILQQLEDVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSEGGEGQCTGSGEMKMSWFNRLRSTFSLRNSSLKGISVKYRHY 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0260 855 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Glsi10g0260 855 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Glsi10g0260 855 Gene3D Laminin 603 632 - -
Glsi10g0260 855 Gene3D Laminin 634 665 - -
Glsi10g0260 855 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 56 815 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Glsi10g0260 855 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 599 - -
Glsi10g0260 855 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
Glsi10g0260 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Glsi10g0260 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Glsi10g0260 855 Pfam Leishmanolysin 62 596 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Glsi10g0260 855 FunFam Peptidase M8, leishmanolysin 113 299 - -
Glsi10g0260 855 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Glsi10g0260 855 Gene3D Leishmanolysin domain 4 498 593 - -
Glsi10g0260 855 FunFam leishmanolysin-like isoform X2 498 593 - -
Glsi10g0260 855 Gene3D Leishmanolysin , domain 2 309 434 - -
Glsi10g0260 855 SMART egf_5 634 663 IPR000742 -
Glsi10g0260 855 SMART egf_5 592 631 IPR000742 -
Glsi10g0260 855 Gene3D - 112 299 - -
Glsi10g0260 855 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
Glsi10g0260 855 Gene3D Leishmanolysin domain 3 438 496 - -
Glsi10g0260 855 Pfam EGF-like domain 635 662 IPR013111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0260 Glsi-ChrGlsi10 1753425 1762529 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0260 10 1753425 1762529 Glsi10g0260 10 1753425 1762529 ECH