Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0255 ATGAATGGTTATATGTACTGGGCTGGCCTAGGTATCTATCACTCTGGTGTGGAAGTTTATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACAAGTGGTGTTTTTGAAGTGGAACCTCGTCAATGCCCAGGATTCAAGTTCAGGAAGTCAATATTCATTGGGACCACACGTTTGGATCCTGTTCAGGTTAGGGAGTTCATGGAACGCCAGTCAACTAGCTACAATGGTGACACATATCACTTGATTGTTAAAAATTGCAACCATTTCTGCAAGGACATCTGTTACAAGTTAACAGGGAAATCAATTCCAACATGGGTAAACCGACTGGCCAGACTAGGTTCAGTTTGCAACTGCGTTCTTCCTGAAGCACTCAGAATTTCTGCTGTGAGGCATGATCCTAATTACCAGCCTCATGATAGTGAGAAGAGAAGGCTGCGAAGTGGCTTCAATTGCTTGTCCTCTATCTCAATGCGGCAAAAGCACTTATCAACATCTTCACTGTTTCTACAGTCACCCATAAGAGGTTGCTTATCGTCATGGGAATTGAGAAAGTCCGTTAATCGTTCCTTGAAAGAAAGGTGA 588 0.4303 MNGYMYWAGLGIYHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTRLDPVQVREFMERQSTSYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSVCNCVLPEALRISAVRHDPNYQPHDSEKRRLRSGFNCLSSISMRQKHLSTSSLFLQSPIRGCLSSWELRKSVNRSLKER 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0255 195 ProSiteProfiles PPPDE domain profile. 1 126 IPR008580 GO:0008233
Glsi10g0255 195 SMART DUF862_2a 1 127 IPR008580 GO:0008233
Glsi10g0255 195 Gene3D PPPDE domains 1 136 IPR042266 -
Glsi10g0255 195 PANTHER DESUMOYLATING ISOPEPTIDASE 1 168 IPR008580 GO:0008233
Glsi10g0255 195 Pfam PPPDE putative peptidase domain 4 125 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0255 Glsi-ChrGlsi10 1720112 1722023 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0255 10 1720112 1722023 Glsi10g0255 10 1720112 1722023 ECH