Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0242 ATGTTGGAAAGTCAGAACGCAGAATCATCCTTGGGGCTTGCAGCAGCACTCATTCTCCCTGCCTTTACTGTATTCAAGACAAAAGCCCCCGCGTCCATTTGCTCATTCACTAGAACTCCGGGCGTCGACAAAGATTGTATCCCTTTTCGGTATAAACTTTTGCCACCACAAATCTGGCTTTTACGGTTATACCCTCCGGTGTTTGTCTCCCCTAGTCTCCTTCCTTTTATATTCCTTAACCACGCTTCACTCTGCCAAAGCAGGATACTCTCTTCTGCCATGGCAATCTTGCTCTATCGCTCTGCCATTTTTGCATTTCTTGCCCTCTTTCACGCATTTAAAATTGTCTATTCTCAATCATTTATCGGCGTGAACTATGGACAAGTCGCCGACAATCTTCCGCCGCCGTCGGCCACCGCTAAGCTTCTTCAATCCACTTCCTTCGAGAAGGTCCGATTGTACGGATCAGACCTTGCCATAATTAAAGCCCTCGCCAACACCGGCATAGGAATTGTCATCGGAGCAGCAAACGGCGACATACCAGCACTTGCTTCTGATCCCAACTTCGCAAAAAACTGGATCAACTCCAACGTAGTTCCCTTCTACCCCGCTAGCAAGATCATCCTTATTACCGTCGGAAACGAGGTCATGACCTCCAAAGACCAGAATTTGATAAATCAATTGCTGCCGGCGGTGCAGAACCTCCAAAATGCCCTCAATGCTGTATCTTTGGGTGGAAAGATTAAGGTATCTACCGTGCATTCCATGGCGGTGCTGAGGCAGTCGGAACCTCCGTCTTCTGGAAGATTCCATCCAGGCTTGACGAACGTCTTGAAGGGGTTGCTGGAATTTAATAATGCCACCGGTTCGCCCTTTGCGATCAATCCTTACCCATACTTTGCCTACAGGAGCGACCCCAGGGCTGAGACCTTAGCCTTTTGCCTTTTTCAACCGAACTCAGGCCGAGTTGACCCAAATACTAAAATCAAGTACATGAATATGTTCGATGCTCAGGTGGACGCTGTTCGTTCTGCCTTGGATTCCATTGGCTTTAAGAATGTTGAGATTGTGGTTGCTGAGACTGGCTGGCCATACAGAGGAGATGACAATGAGGTGGGTCCAAGTCTTGAGAATGCTAAGGCTTATAACGGTAACTTGATTGCGCACCTTCGGTCGATGGTTGGGACCCCATTGATGCCCCGAAAATCGGTAGATACATACCTTTTTGCGCTATACGACGAGGACTTAAAGCCTGGACCTACTTCTGAGCGAGCCTTTGGGCTTTTCAAGCCTGATTTAAGCATGACCTATGACGTTGGCCTCTCCAAGCCGTGCAACCAGACTCCGGCTACTCCAACGCCAACACCAAAGAAAGCTTTATGGTGTGTGCCAAAAGCAGGGGTATCAGATGCACGGCTTCAAGCAAATTTGGATTATGCTTGTGGACATGGGATTGATTGTAGCCCAATCCAATCTGGCGGGGCGTGTTTTGAACCAAACACGGTGACAGCACATGCTGCATATGCCATGAATCTCTTCTATCAAACTGCTGGTCCTTATCCATGGAATTGTGACTTCTCACAAACAGCCATACTGTCGTCGAGTAATCCTAGTAAGTTCCTATGTGATTTCTGCACAGGAGCGAGCGAGCACGAGAGAAATCACCAACGGAGAAAGAAAACGATAAGTGGGAAAAGGAAGAAAATGGCGACGAGGGAGAGGGAGAGAGATCTAGAGCTCCTCATCCCAGTGTCAGGAATCTCTGAAACTGCAGGCTCTAAATCATCCTCCCCTTCTTCTTCTCCTCCCGCTATCTCCACGCATCACCATTCCGGCCAAGAGGCATTTTCCAAGGTAATTCGCAGCTGGGCCTCAAAGAAGTTTATGTCAGGATGTGTCATCCTTCTTCCTATGGCTATAACATTCTATATCACCTCGGCAGTTATCCGCCTTGTGGATGGTTTCTTCTCCCCTATATATTCTCATCTAGGGATCAATATTTTTGGTCTTGGATTTATTACTTCCATCACTTCCATCTTCTTAGTTGGTATTTTCACGTCATCTTGGTTGGGAGCGTCTGTTCTCACCCTTGGAGAATGGTTCATCAAGAAAATGCCTCTTGTAAGCTATATCTATGCTGCCTCAAAGCAAATAAGTGCAGCAATATCACCGGATCAAAACTCAAATGCGTTCAAGGAAGTTGCCATCATAAGGCATCCGCGTGTTGGTGAATATGCATTGGGGTTCATCACTTCTACGGTCATACTACAGAGAAACACAGATGAAGAAGAGCTTTGTTGCGTTTATGTACCCACCAATCACTTATATCTTGGAGATATTTTTCTCGTTAGCTCAAAGGATGTTCTGAGGCCTAATCTTTCGGTCCGAGAAGGGATAGAAATTGTCATATCTGGTGGCATGTCAATACCTCAAATTTTGACTACAATGGATGCTAAAGCTAATCTGGCCGCAAGAATGGGAAACTTTACAACATCAAAAGTATAA 2505 0.4647 MLESQNAESSLGLAAALILPAFTVFKTKAPASICSFTRTPGVDKDCIPFRYKLLPPQIWLLRLYPPVFVSPSLLPFIFLNHASLCQSRILSSAMAILLYRSAIFAFLALFHAFKIVYSQSFIGVNYGQVADNLPPPSATAKLLQSTSFEKVRLYGSDLAIIKALANTGIGIVIGAANGDIPALASDPNFAKNWINSNVVPFYPASKIILITVGNEVMTSKDQNLINQLLPAVQNLQNALNAVSLGGKIKVSTVHSMAVLRQSEPPSSGRFHPGLTNVLKGLLEFNNATGSPFAINPYPYFAYRSDPRAETLAFCLFQPNSGRVDPNTKIKYMNMFDAQVDAVRSALDSIGFKNVEIVVAETGWPYRGDDNEVGPSLENAKAYNGNLIAHLRSMVGTPLMPRKSVDTYLFALYDEDLKPGPTSERAFGLFKPDLSMTYDVGLSKPCNQTPATPTPTPKKALWCVPKAGVSDARLQANLDYACGHGIDCSPIQSGGACFEPNTVTAHAAYAMNLFYQTAGPYPWNCDFSQTAILSSSNPSKFLCDFCTGASEHERNHQRRKKTISGKRKKMATRERERDLELLIPVSGISETAGSKSSSPSSSPPAISTHHHSGQEAFSKVIRSWASKKFMSGCVILLPMAITFYITSAVIRLVDGFFSPIYSHLGINIFGLGFITSITSIFLVGIFTSSWLGASVLTLGEWFIKKMPLVSYIYAASKQISAAISPDQNSNAFKEVAIIRHPRVGEYALGFITSTVILQRNTDEEELCCVYVPTNHLYLGDIFLVSSKDVLRPNLSVREGIEIVISGGMSIPQILTTMDAKANLAARMGNFTTSKV 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0242 834 Gene3D Glycosidases 121 447 - -
Glsi10g0242 834 SUPERFAMILY (Trans)glycosidases 122 440 IPR017853 -
Glsi10g0242 834 MobiDBLite consensus disorder prediction 588 609 - -
Glsi10g0242 834 FunFam Glucan endo-1,3-beta-glucosidase 14 120 447 - -
Glsi10g0242 834 FunFam glucan endo-1,3-beta-glucosidase 7 456 545 - -
Glsi10g0242 834 SMART X8_cls 460 544 IPR012946 -
Glsi10g0242 834 Pfam Glycosyl hydrolases family 17 122 439 IPR000490 GO:0004553|GO:0005975
Glsi10g0242 834 Pfam X8 domain 460 530 IPR012946 -
Glsi10g0242 834 Pfam Protein of unknown function (DUF502) 674 774 IPR007462 -
Glsi10g0242 834 MobiDBLite consensus disorder prediction 553 573 - -
Glsi10g0242 834 Gene3D - 456 560 - -
Glsi10g0242 834 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 110 530 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0242 Glsi-ChrGlsi10 1644520 1649821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0242 118 542 Miscellaneous Gene Families AT2G16230 68.852 0.0 611