Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0230 ATGGAATTGCAGCGGGCATTACTGAAGACAGCTTTAATCTTGCTGTTTGTTCAGTTTGGTTTGTCTTTGAACCCCAGAATCGAATGGCTGGCGTTGGTGCAGCTTCGCTCATCGTTGGGAATCAGGGCCAAGGACTGGCCTATAAAAACGGAGCCATGCAGGAACTGGAGCGGGGTTCGGTGCCAGATGGGACGAGTGGTTGGCATCAATGTATCCGGGTTAAGACGAACCCGAGTAGGGCGTCTCAAACCCCGCTTTGCAGTGGATTCTCTTGCCAATTTAACCCTCTTAGTGTCATTCAATGCTTCTGGTTTTTTGCTTAATGGGTCTATTCCTGAGTGGTTTGGACAGCGCCTTAGTACACTTGAAACGCTGGATCTAAGTTCTTGCTCGCTGACGGGTCCGATTCCTTCGTCGCTTGGGAGTTTGAGTAGGCTGCAATTCCTGATTCTGTCAGACAATAGTCTCACCGGTAGAATGCCTTCAACATTGGGACAGTTATCGGCACTGTCATTTCTTAATCTCTCAAGGAATTCGCTGACTGGATCAATACCCAACTCTTTCTTGTCTCTTGGCAATCTTACCAGGCTGGACCTTTCTTCTAATTTCTTATCTGGGTCAATTCCAGCCTATCTTGGTACCCTTTCTAGTCTCCACTCCTTGCGTCTTTCCGACAATGGATTCACAGCGTCAATCCCTGTTCAACTGGGCAACCTTTCCCAGTTAGTTCAACTTGACCTTAGCAAGAATTCTTTTGATGGCGCCCTTCCTGCTCCTTTGTGGTCAATGCGCAGCCTGCATTTTCTTGATGTATCCAGCAACAGCCTTACTGGTATCCTACCAAAACTTAGTTCCAATATCAATTCTACCGGTGCCATCTTCAATCTCTCAAACAATTTATTCTATGGATTTCTGAATAATTCGTTTACCAAGTCTAAAAAATTTGATTTGTCCAGTAATTATTTCCAAGGCGAGGCGCCAGATGATGGTTTAAGTAGTGCTACTCTAGCTAGAAATTGCCTAAAGGGGGCTCCCAATCAAAGAAGTTTTAGAGATTGTGGACTGTTTTATGCTCAGAGAAGTCTAATCTATTTTGGTGCCCAAGAACCAGCAATATCGCCATTGCCCCAACCTGAGTCCAGAAACAGAAAACGAGTGATATTCATTTTGGCAGGTACATTTGGTGGGCTTGCCTTTGTTGTGCTCCTAGTATTGGTCCTCACACTGCTTGTAGGAAAATGTGATAATAGCATTGCAAATCAGAAAGGGACAGCAAATGTGGGACCTGTTCTAGAAGGGGAAAGTCCAACGCCTCCTAAGGATCCTGTAGCAGTAACTGGCATGGGAGAATCATTTACTTATGAGCAAATGCTCCATTTGACTGGTAATTTTGCTGAAGCAAATATTATTAAACATGGTCATTCCGGGGACCTCTTCTGGGGAATCTGGGAAGGTGAAGTAACTGTGATAGTCAAAAAGGTAGATTTGAATTTATTCAAGAGAGAATCATTCATGTTGGAATTGGAACTATTATGCAAGGATTCACATGCAAGATTGGTCCCGCTACTGGGGTACTGCTTGGAGAATGAGAATGAGAAATTTTTAATATACAAGCACATGCCAAATGGAGATTTGGCTACTTCCTTGCACAGAGTCACAGGCTCAGATGATAAATTACAATGTCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAGGGCCTACATTACCTACACGAGTGTAGCCCTCCCCTTGTTCACAGAGATGTCCAAGCAAGCAGCATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATCTTCATCAGAATGTCATCACAAGGTTTTTCCGCAAGTCACAATCTTTTGATCAAGGCAATTCTGGTTCATCAACTGTAACTTGTGCTTATGATGTCTACTGTTTTGGGAAGGTCTTACTTGAGCTTGTTACTGGTAAGCTTGGAGTTAGCAAATCAGATGATGCCACCACAAGAGAGTGGATAGAACAAACCCTGTCTTACATCAGCATATATAACAAAGAACAGTTGACAAAGATTGTTGACCCATATCTGATAGTAGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTAGCCAGATCATGCCTCAACCCCAAGCCTTCCAAACGCCCTGCAATAGGGTATGTCCTAAAAGCACTGGAAAATCCGTTGAAGATTGTGAGAGACGAGAATATAAGCTCAGCGAGATTGAGAACAAATTCATCTAGGAGATCTTGGAGCCTTGCATTCTTTGGGAGCTGGAGACAGAGCTCATCAGAGAGTGCTACTGCCACAGGGCATACAAACAGAGAGGGTATTTGTGGCTCTAAACAATCAGGAAGGGTAGGCTCTCACGGTAGTGGTGGGAATGATCACTCATCTTCCCATAAAAGGTTATCCAATGAAATATTCCCTGAACCATTGGATATGCAAGAGGTGGAGAGGCAAGAAGAACATCGAGCAAATGGATTTGGTGACTCTTCGTTAGTCACGTAA 2559 0.4396 MELQRALLKTALILLFVQFGLSLNPRIEWLALVQLRSSLGIRAKDWPIKTEPCRNWSGVRCQMGRVVGINVSGLRRTRVGRLKPRFAVDSLANLTLLVSFNASGFLLNGSIPEWFGQRLSTLETLDLSSCSLTGPIPSSLGSLSRLQFLILSDNSLTGRMPSTLGQLSALSFLNLSRNSLTGSIPNSFLSLGNLTRLDLSSNFLSGSIPAYLGTLSSLHSLRLSDNGFTASIPVQLGNLSQLVQLDLSKNSFDGALPAPLWSMRSLHFLDVSSNSLTGILPKLSSNINSTGAIFNLSNNLFYGFLNNSFTKSKKFDLSSNYFQGEAPDDGLSSATLARNCLKGAPNQRSFRDCGLFYAQRSLIYFGAQEPAISPLPQPESRNRKRVIFILAGTFGGLAFVVLLVLVLTLLVGKCDNSIANQKGTANVGPVLEGESPTPPKDPVAVTGMGESFTYEQMLHLTGNFAEANIIKHGHSGDLFWGIWEGEVTVIVKKVDLNLFKRESFMLELELLCKDSHARLVPLLGYCLENENEKFLIYKHMPNGDLATSLHRVTGSDDKLQCLDWITRLKIAIGAAEGLHYLHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVTAQGDLHQNVITRFFRKSQSFDQGNSGSSTVTCAYDVYCFGKVLLELVTGKLGVSKSDDATTREWIEQTLSYISIYNKEQLTKIVDPYLIVDEDLLEEVWAMAIVARSCLNPKPSKRPAIGYVLKALENPLKIVRDENISSARLRTNSSRRSWSLAFFGSWRQSSSESATATGHTNREGICGSKQSGRVGSHGSGGNDHSSSHKRLSNEIFPEPLDMQEVERQEEHRANGFGDSSLVT 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0230 852 FunFam Putative LRR receptor-like serine/threonine-protein kinase 540 761 - -
Glsi10g0230 852 Gene3D Ribonuclease Inhibitor 188 356 IPR032675 -
Glsi10g0230 852 ProSiteProfiles Protein kinase domain profile. 464 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0230 852 SUPERFAMILY Protein kinase-like (PK-like) 441 741 IPR011009 -
Glsi10g0230 852 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 26 184 - -
Glsi10g0230 852 ProSiteProfiles cAMP/cGMP binding motif profile. 469 518 IPR000595 -
Glsi10g0230 852 Pfam Protein tyrosine and serine/threonine kinase 469 737 IPR001245 GO:0004672|GO:0006468
Glsi10g0230 852 SUPERFAMILY L domain-like 39 327 - -
Glsi10g0230 852 SMART LRR_typ_2 215 239 IPR003591 -
Glsi10g0230 852 SMART LRR_typ_2 167 190 IPR003591 -
Glsi10g0230 852 SMART LRR_typ_2 191 213 IPR003591 -
Glsi10g0230 852 SMART LRR_typ_2 263 286 IPR003591 -
Glsi10g0230 852 SMART LRR_typ_2 143 166 IPR003591 -
Glsi10g0230 852 MobiDBLite consensus disorder prediction 781 852 - -
Glsi10g0230 852 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Glsi10g0230 852 Pfam Leucine rich repeat 149 202 IPR001611 GO:0005515
Glsi10g0230 852 Pfam Leucine Rich Repeat 122 143 IPR001611 GO:0005515
Glsi10g0230 852 FunFam Predicted protein 434 539 - -
Glsi10g0230 852 MobiDBLite consensus disorder prediction 781 811 - -
Glsi10g0230 852 FunFam Leucine-rich repeat receptor protein kinase EMS1 185 283 - -
Glsi10g0230 852 Gene3D Transferase(Phosphotransferase) domain 1 540 761 - -
Glsi10g0230 852 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 90 742 - -
Glsi10g0230 852 Gene3D Phosphorylase Kinase; domain 1 440 539 - -
Glsi10g0230 852 MobiDBLite consensus disorder prediction 812 843 - -
Glsi10g0230 852 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0230 Glsi-ChrGlsi10 1577600 1580889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0230 28 633 Miscellaneous Gene Families AT2G16250 46.856 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Glsi10g0230 PK_Tyr_Ser-Thr 6.6e-21 CL0016