Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0224 ATGCAGTGCCAGAATTATGATCCTTTGTTCCCCGACCAACCCGTGGTGGACCAATACCTACCAGTGTGGGCTAATTTACCGGCCTTCCGGTCCAAGGCAGCCTTCATTTGGGCAGAAGGCAGCTCCACCACTTCCCTCACCTATGCTCAACTCAATGCCTCAGTGCACCTCATTTCTTCTCATCTACTCATTCCCTTACAAAGAGGGGACACTGTCATCATTTTGTGCCCTCCAGGTCTCCTCCTTGTCCAGCTAATCTTTGGGTGTCAAAGGGCTGGCCTTTTGAGCGTTCCTATCTTCCCTCCTCATCCTTCTTTTGCTCGACAAAATTATCACCACCTTCTCAGAGTTCTTTCACAGACAAAGCCCAAAGCTGCCATTGCTCCCCCTGATTACATATCCAGCGTTCAACTCTACTTGTCTTCCCCCCATAACGATGAGAAGCTGGCCCGGATGTTACAAAATGTCCGTTGGATCTCTGTTGATGATGTCAAACGTGGTAATGTCAATTTAAGTATCTGTGATTCTCATACATACAATGGTTGCCGAGCAGACGAGGTTTATTTGGTTCAGTACACGTCGGGTGCCACTGGGATTCCAAAACCTGTCCTCGTCACAGCCGGATCAGCCGCTCATAATGTTAGGACAGCAAGGAAAGCCTACGATCTTCATCCAAACAGTGTTATTGTTTCATGGCTGCCTCAATACCATGATTGTGGCCTTGTGTTTCTATTATTGACCGTTGTATCCGGTGCCACTTGTGTCCTCGCCTCCCCAACTGCATTCATCAATCGCCCTAGACTCTGGCTTGAACTGATGTCTGAGTTCAAGGCTACATGCACTCCTGTTCCATCATTCACGCTGCCACTGGTGGTCAGGCGAGGTGGGATACACAAAGCAACTGTTCCCATAAATCTCTCCACTTTAAAGAACCTTATAATCATAAATGAGCCAGTGTACAGAGCTTCGGTTGAAGAATTTGTTCGTGTGTTTTTGCCATTTGGGTTAAGTCCTTCATCTATCTCGCCTTCTTACGGGTTAGCGGAGAATTGCACTTTTGTTTCAACTGCTTGGAGATCAGGTGATAGCTATTCTAGCTTTCCAGACTTTCCAACTCACAGCAAGCTTTTGCCAGTTGGGAGGCTTTCCTCTCAAAGCAGAAATGAGGAACATGAGGACATGGACATTATGGTGGTAAACGAAGAAACATTTGAAGCAGTCGAGGACGGCATTGAAGGAGAAATATGGGTTTCATCCCCGAGCAACGCCTCTGGCTATCTAGGGCACCCTTTTTTAACGAGGGAGGTGTTTCATGGGAGACTAAGAAACATAATTGACAGGTGCTTTGTTCGAACAGGCGATAGAGGGGTTGTAAAAGGAGAGCAGAGGTATCTGTTTGTGACCGGTCGGTGCCAAGACGTTATCGAGCTCCAAGATGGTCGAAACATTCATCCTCATTACATAGAGACTGCGGCCTATAACACTTGTCCAAAGTCACTTAGAGGAGGTTGCCTTGCTGCCTTCCAGATTTCAACAACAATTGCACTTGTGGCTGAGATGCAGAGAATTGAAAATGACACTGGGGTTTTGAGGAGAATCTGCATAGAAATTAAACAAGGTGTTCTGAAAGAAGAGAAGATTGAGATTGGATTGGTGGCTTTGGTTAAGAGCGAGTGCGTTCCAAAAACCACTTCAGGAAAATTACAAAGATGGGCAGCGAAGGACAAGTTTATTGCAGGCAAAATGAGAGTTATGATGGAGATGCAATTCGGAAAACCAGAGGGGAGGGCAGGAGCTCGTACGTCATTAGTGTCACTTCTGTGA 1824 0.4655 MQCQNYDPLFPDQPVVDQYLPVWANLPAFRSKAAFIWAEGSSTTSLTYAQLNASVHLISSHLLIPLQRGDTVIILCPPGLLLVQLIFGCQRAGLLSVPIFPPHPSFARQNYHHLLRVLSQTKPKAAIAPPDYISSVQLYLSSPHNDEKLARMLQNVRWISVDDVKRGNVNLSICDSHTYNGCRADEVYLVQYTSGATGIPKPVLVTAGSAAHNVRTARKAYDLHPNSVIVSWLPQYHDCGLVFLLLTVVSGATCVLASPTAFINRPRLWLELMSEFKATCTPVPSFTLPLVVRRGGIHKATVPINLSTLKNLIIINEPVYRASVEEFVRVFLPFGLSPSSISPSYGLAENCTFVSTAWRSGDSYSSFPDFPTHSKLLPVGRLSSQSRNEEHEDMDIMVVNEETFEAVEDGIEGEIWVSSPSNASGYLGHPFLTREVFHGRLRNIIDRCFVRTGDRGVVKGEQRYLFVTGRCQDVIELQDGRNIHPHYIETAAYNTCPKSLRGGCLAAFQISTTIALVAEMQRIENDTGVLRRICIEIKQGVLKEEKIEIGLVALVKSECVPKTTSGKLQRWAAKDKFIAGKMRVMMEMQFGKPEGRAGARTSLVSLL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0224 607 CDD FAAL 24 579 IPR040097 GO:0008610
Glsi10g0224 607 Pfam AMP-binding enzyme 30 477 IPR000873 -
Glsi10g0224 607 Gene3D - 4 471 IPR042099 -
Glsi10g0224 607 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 588 - -
Glsi10g0224 607 SUPERFAMILY Acetyl-CoA synthetase-like 27 579 - -
Glsi10g0224 607 Gene3D - 472 595 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0224 Glsi-ChrGlsi10 1547841 1549664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0224 135 574 Monolignol Biosynthesis Gene Families AT4G19010 23.913 6.42e-11 63.2