Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0222 ATGAGTTGGACAAGAGAAGAGAACAGACGATTTGAGGATGCTCTTGCTGTTTATGGACCGGAAGACCCATATCGGTGGCAACATGTAGCCAACGCTGTTGGTGGAAAATCCGCGCAGGAAGTGAAAAGGCACTATGAGATCCTCATGGAGGATGTCAATCGAATAGAGCGTGATCAAGTCCCATTACCCACATACACCGGTGCTGGCATCAACTCTAACCCTACTCCCCATGACCACGGGAGGATGAGGAATCTACATCTCTAG 264 0.4924 MSWTREENRRFEDALAVYGPEDPYRWQHVANAVGGKSAQEVKRHYEILMEDVNRIERDQVPLPTYTGAGINSNPTPHDHGRMRNLHL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0222 87 Gene3D - 1 62 - -
Glsi10g0222 87 FunFam Transcription factor SRM1 1 62 - -
Glsi10g0222 87 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Glsi10g0222 87 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Glsi10g0222 87 SMART sant 2 51 IPR001005 -
Glsi10g0222 87 CDD SANT 2 45 IPR001005 -
Glsi10g0222 87 MobiDBLite consensus disorder prediction 63 87 - -
Glsi10g0222 87 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Glsi10g0222 87 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 69 IPR044636 GO:0003700
Glsi10g0222 87 Pfam Myb-like DNA-binding domain 1 45 IPR001005 -
Glsi10g0222 87 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Glsi10g0222 87 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0222 Glsi-ChrGlsi10 1543452 1544620 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi10g0222 Myb_DNA-binding 2.1e-08 CL0123