Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0206 ATGGAAGGCACTTGGGCAGCCCTGAATGGTAGTGCCAATCTAGTTAAAGCTAGCAAGGGAACTGCAACCAATAGAGGTACTGGGTTCTGGGGTGAGAGCACTAGGGGAAGTCTCGACAACAGATTTATTAGCATTCAATCGTGTAAACGTTCAAAACCCCAAATCAACCTTAGAAAGTTCAACCCTGGCGTTGCTTACTCTGTTTACACATCAGACATCAACAAAGACTCTGTGGCATTCCAAGTTCCATTTTATGAGACTTCAAAAGCCGACCCAAATAAGGTGGCTTCCATCATATTGGGAGGAGGTGCCGGAACTCGCCTCTTTCCTCTCACTAGCAGAAGAGCCAAGCCTGCGGTTCCAATGGGTGGGTGTTACAGACTCATAGATATCCCGATGAGTAATTGTATCAACAGTGGCATCAGAAAAATATTCATTTTAACGCAGTTTAATTCTTTCTCTCTCAATCGTCACCTGTCAAACACATATAATTTTGGAAACGGCGTGAATTTTGGAGATGGTTTTGTGGAGGTATTGGCTGCCACTCAAACACCTGGAGAATCAGGGAAAAACTGGTTCCAAGGGACGGCTGATGCTGTGAGGCGATTTATCTGGGTCTTTGAGGATGCCAAGAACAAGAATGTTGAAAATATAGTCATACTTTCTGGTGATCATCTTTACCGAATGGACTACATGAAGTTTGTGCAGAAACATATAGATACAAATGCTGATATCACAGTTTCATGCGTACCCATGGATAACAGCCGTGCATCAGATTATGGACTGATGAAAATTGATCAAAAAGGACGGATTATGCAGTTTGCAGAAAAACCCAAGGGATCTGATCTGAAGGCAATGCAAGTGGACACCACTCTTCTAGGGTTATCTGCACAAGAAGCACAGGAATATCCTTACATTGCATCGATGGGTGTCTATGTATTCAGAACTGAGACCCTTCTGAAACTGTTGAGATGGAGCTATCCTTCATGCAATGACTTTGGATCTGAAATTATTCCTTCTGCTCTGAGGGAGCACAATGTCCAAGCATATTTGTTCAATGACTACTGGGAAGATATTGGAACCATAAAGTCCTTCTTTGATGCCAATCTCGCCCTAACAGAACAGCCTCCAAAGTTTGAATTCTATGATCCAAAGACTCCTTTCTTCACTTCTCCAAGATTTTTACCACCCAGTAAAGTAGAACAGTGCAAGATCGAGAAGGCAATTATTTCTCATGGTTGCTTTTTGAGGGAGTGCAGCGTTCAACATTCTATAGTTGGTGTGCGCTCCCGTTTAGAGTCTGGTGTGGAGCTTCAGGATACCATGATGATGGGTGCAGACTACTATCAAACTGATTCAGAAATTGCATCTCTACTCGCACAAGGAAAGGTTCCAATTGGTGTTGGAGAAAATACCAAAATCAGGTATTGTATAATCGACAAGAACGCCAAGATAGGAAGAAATGTGATTATTGAAAATCGTGATGGCGTTCAAGAAGCAGAGAGGGCCGAGGAAGGCTTTTACATTAAGTCGGGCATCACAACTATAATGAAGAATGCGACAATTAAAGATGGAACGGTTATCTAA 1587 0.4253 MEGTWAALNGSANLVKASKGTATNRGTGFWGESTRGSLDNRFISIQSCKRSKPQINLRKFNPGVAYSVYTSDINKDSVAFQVPFYETSKADPNKVASIILGGGAGTRLFPLTSRRAKPAVPMGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSNTYNFGNGVNFGDGFVEVLAATQTPGESGKNWFQGTADAVRRFIWVFEDAKNKNVENIVILSGDHLYRMDYMKFVQKHIDTNADITVSCVPMDNSRASDYGLMKIDQKGRIMQFAEKPKGSDLKAMQVDTTLLGLSAQEAQEYPYIASMGVYVFRTETLLKLLRWSYPSCNDFGSEIIPSALREHNVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPSKVEQCKIEKAIISHGCFLRECSVQHSIVGVRSRLESGVELQDTMMMGADYYQTDSEIASLLAQGKVPIGVGENTKIRYCIIDKNAKIGRNVIIENRDGVQEAERAEEGFYIKSGITTIMKNATIKDGTVI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0206 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 307 317 IPR005836 GO:0005978|GO:0008878
Glsi10g0206 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 52 528 IPR011831 GO:0005978|GO:0008878
Glsi10g0206 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 192 200 IPR005836 GO:0005978|GO:0008878
Glsi10g0206 528 FunFam Glucose-1-phosphate adenylyltransferase 394 528 - -
Glsi10g0206 528 CDD ADP_Glucose_PP 98 359 - -
Glsi10g0206 528 NCBIfam glucose-1-phosphate adenylyltransferase 96 492 IPR011831 GO:0005978|GO:0008878
Glsi10g0206 528 SUPERFAMILY Trimeric LpxA-like enzymes 391 528 IPR011004 -
Glsi10g0206 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 84 393 IPR029044 -
Glsi10g0206 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 101 120 IPR005836 GO:0005978|GO:0008878
Glsi10g0206 528 Pfam Nucleotidyl transferase 97 374 IPR005835 GO:0009058
Glsi10g0206 528 CDD LbH_G1P_AT_C 396 522 - -
Glsi10g0206 528 FunFam Glucose-1-phosphate adenylyltransferase 78 393 - -
Glsi10g0206 528 Gene3D Hexapeptide repeat proteins 394 528 - -
Glsi10g0206 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 489 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0206 Glsi-ChrGlsi10 1451172 1453888 Dispersed/Wgd