Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0204 ATGCTTGGTCATTTGGTTGAGGAGCATGGTTGGTATGGTTATTTTGCCATCCTTGTTGGTCCCCTACTACTTATTGTACTATGTCAAAAAGTGTTGGCGCCACAGTACAATAACAAGTCCGCTGCCGGGATTCCTCCAGGAAATCGAGGGATTCCGTTCGTAGGAGAAACACTGCAGTTCATGGCTGCCATTAACAGCAGTAAAGGAGTCCATGAATTTGTCCGAGTTCGCCGCCTCCGATATGGGAATTGCTTCAAGACGAGGTTATTTGGGGAGACCCACGTTTTTTTTTCGAGCATGGAGTCCGCAAAAGCGATTCTAAAGAATGAGGTGGGGAAATTCTCAAAGAGGTACATAAAGTCAATAGCGGAGCTGGTGGGACCTGACAGCTTACTCTCTGCTTCTCACCACCATCACAAACTGATTCGGGCACATCTCTTCCCGTTGTTTTCAACTAGCTCGTTGTCACATTTTATTAACCACTTCGATCAACTGGTTGTCCAAGCTATGAGTGGCTGGCCACGTGGAGACGTTGTCGTCATACAACACGAAGCACTCAAGTTAACTTGTAAAGCGATGTGCAAGATGTTGATAAGCATAGAGAGTGGCTATGAATTAGAGATGATGCAGACAGATGTTGCTCGTGTATGTGAAGCAATGCTTGCCTTCCCTTTGAGGTTTACACGGACCAGATTCTATAAAGGCCTTCAGGCTAGAAAAAGAATCATGGGCATATTGGAGAAGGCGATCAATGAAAGAAGAATTGGATCCGGTGCTGAAGATTTTCTTCAACGACTTTTAGAAGAGAATGATAATAAATTTAATCAAAATGGAGTAGCAAGGCTAACAGACAGAGAGATCCAAGATAATATATTAACCATGATAATCGCAGGACAGGACACAACAGCAAATGCCATTACATGGATGGTGAAATTTGTGGACGAGAATCCGGAGGTTCTTGCTAAGCTTATGGAGGAGCAACTTCAGATTGCGAAAAAAGTTAGCAGTTGGAATCTTACATTGGAAGATCTTAATGAGATGCCATACGCTTCCAAGGTGGCAAAAGAAGCCTTAAGGATGGCATCTGTAGTGCAGTGGTTCCCAAGAGTAGCGCTCGAGGACTGTGAGATTGAAGGCACATATACTTTTTTCTTATCTACTTTAAAGGACGAACTCATAGATATGAGTATTGAGCATTTAATGGTTATTTCTACAGGATTTAAAATCAAGAAAGGGTGGAACATTAACATCGATGCTAGATCAATACACCTCGATCCAACTGTGTACAATGATCCTCACGTTTTCAATCCTTCAAGATTTCATGTAAAGTCAAAACCATACAGCTTCTTAGCCTTTGGGATGGGAGGAAGGACATGCCTTGGGAAGAACATGGCTAAAGCCATGATGCTGGTGTTTCTCCACCGTCTCATTACCACTTGCAAGTGGAAGGTGATTGATTCAGACTCGAGTATTGAGAAATGGGCGCTTTTTTCAAAACTAAGAAGTGGGTGTCCGGTTCGTTTGACGTCTATTAAGGACACAACCAAAATTACGTCACAGGATTAG 1566 0.4291 MLGHLVEEHGWYGYFAILVGPLLLIVLCQKVLAPQYNNKSAAGIPPGNRGIPFVGETLQFMAAINSSKGVHEFVRVRRLRYGNCFKTRLFGETHVFFSSMESAKAILKNEVGKFSKRYIKSIAELVGPDSLLSASHHHHKLIRAHLFPLFSTSSLSHFINHFDQLVVQAMSGWPRGDVVVIQHEALKLTCKAMCKMLISIESGYELEMMQTDVARVCEAMLAFPLRFTRTRFYKGLQARKRIMGILEKAINERRIGSGAEDFLQRLLEENDNKFNQNGVARLTDREIQDNILTMIIAGQDTTANAITWMVKFVDENPEVLAKLMEEQLQIAKKVSSWNLTLEDLNEMPYASKVAKEALRMASVVQWFPRVALEDCEIEGTYTFFLSTLKDELIDMSIEHLMVISTGFKIKKGWNINIDARSIHLDPTVYNDPHVFNPSRFHVKSKPYSFLAFGMGGRTCLGKNMAKAMMLVFLHRLITTCKWKVIDSDSSIEKWALFSKLRSGCPVRLTSIKDTTKITSQD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0204 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Glsi10g0204 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 Gene3D Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 PANTHER CYTOCHROME P450 26 41 485 - -
Glsi10g0204 521 Pfam Cytochrome P450 45 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 Pfam Cytochrome P450 406 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0204 521 CDD CYP90-like 77 509 - -
Glsi10g0204 521 SUPERFAMILY Cytochrome P450 43 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0204 Glsi-ChrGlsi10 1441319 1444162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0204 23 482 Cytochrome P450 AT1G19630 57.173 0.0 516