Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0194 ATGTCCTGGCAAAACAAAGACGAAGTTTTGATTTTCCGTATAAAGGGAATGGCGACTCCTGTTGAGCCTCCGAATGGGATTAGAACTGAAGGAAAGCATTATTACTCCATGTGGCAAACCTTGTTTGAGATTGATACAAAATATCTGCCCATCAAGCCTATTGGTCGAGGAGCGTATGGAATTGTGTGCTCTTCTGTGAATAGAGAAACCAATGAAAAAGTTGCGATTAAGAAGATACATAATGTTTTTGAAAACCGTGTTGATGCCCTAAGAACTTTGCGTGAATTGAAACTTCTTCGGCATCTTCAACACGAAAATGTGATTGCTTTAAAAGATATCATGATGCCTATTCATCGAAAAAGTTTCAAGGATGTTTATCTTGTTTATGAACTTATGGACACAGATTTGCATCAGATTATAAAGTCTTCACAAGCACTCTCTAATGATCATTGCCAATATTTCCTCTTTCAGCTGCTTCGGGGCTTGAAGTATCTTCACTCAGCCAACATCCTTCATCGTGACTTGAAGCCCGGGAATCTTCTGATCAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACTAACAGCAGCAAGAACCAGTTCATGACAGAGTATGTTGTCACTCGGTGGTATAGAGCACCAGAGCTCCTACTTTGCTGTGACAACTACGGGACTTCTATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCGGAGTGTCTCAACCAGCTAAAACTAATTATCAACATTCTTGGCAGCCAAAGAGAGGAGGATCTTGAATTTATTGATAATCCAAAGGCAAAGAAGTACATCAAATCACTTCCGTATTCCCTGGGAACCCCCTTTTCCAGACTTTATCCCAACGCCCATCCATTGGCAATTGATCTGCTGCAGAAGATGCTTGTTTTCGACCCATCAAAGAGGATTAGTGTTACTGAAGCACTTCAACACCCTTATATGGCGTCTCTGTATGATCCTAATAGCGATCGTCTAGCCATTGTTCCTATTGATCTTGACATAGAGGAGGATTTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAACCTGTCATGGCGAATGCAGTGGTGTGCTCATAA 1167 0.4147 MSWQNKDEVLIFRIKGMATPVEPPNGIRTEGKHYYSMWQTLFEIDTKYLPIKPIGRGAYGIVCSSVNRETNEKVAIKKIHNVFENRVDALRTLRELKLLRHLQHENVIALKDIMMPIHRKSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNSSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDLEFIDNPKAKKYIKSLPYSLGTPFSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMASLYDPNSDRLAIVPIDLDIEEDLGEEMIREMMWKEMLHYHPEPVMANAVVCS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0194 388 Gene3D Transferase(Phosphotransferase) domain 1 132 361 - -
Glsi10g0194 388 FunFam Mitogen-activated protein kinase 132 361 - -
Glsi10g0194 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 47 343 - -
Glsi10g0194 388 SMART serkin_6 48 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0194 388 Gene3D Phosphorylase Kinase; domain 1 35 371 - -
Glsi10g0194 388 ProSitePatterns MAP kinase signature. 83 186 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi10g0194 388 CDD STKc_TEY_MAPK 42 377 - -
Glsi10g0194 388 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Glsi10g0194 388 ProSiteProfiles Protein kinase domain profile. 48 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0194 388 FunFam Mitogen-activated protein kinase 34 142 - -
Glsi10g0194 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Glsi10g0194 388 SUPERFAMILY Protein kinase-like (PK-like) 40 341 IPR011009 -
Glsi10g0194 388 Pfam Protein kinase domain 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0194 Glsi-ChrGlsi10 1386921 1389146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0194 17 384 MAP Kinase Gene Family AT1G10210 86.413 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi10g0194 Pkinase 4.3e-72 CL0016