Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0193 ATGGTCACTTTTGTAAGTGGGGAGCCTATAGGCTATAGCTACACTGCATGGGTTGCTTTCCAGCACGATCACAGGGTGGATGATTATGGTGTTGAGACTGTTGGGTTGACAAAATTAAGGTTGCAAGAAGCAGCCAGTGCTCTAGATTCCCCACTTCTTGATGCTTATGCTTTGGGGTTTGGTGTCAGAAATCTCCAATTATTGTTGCTTTCCTTGAAAACCTTTCGTGGATTCATGTCTCCAGTTCTCAGTGAAATCCTTCGTTCCGGGTTTATGATAAATTCCTCCCTGAGGCGCAGGACCCACTTAGTCCAATCTTTCTCTGTTGTATTCCTCTACTGGTTCTATAAAATAGCCTGTTTGGTGTATATATATCTCATGGACTTGTACAGTGGAAATTCCAGCATGTCCACAAAATTTCAGAGCTCTGGGTCTGAAGAGGATTTGCAGGTTTTGATGGATGAAAGAAAGAGGAAGAGAATGCAATCCAATCGGGAATCAGCGAAGCGATCCCGTATGCGAAAGCAGAAGCACGTGGATGATCTGATGGGCCAAGTGGGTGAACTGAGAAAGCAAAATAGCAAGATCCTTACAGACATAAACATCACCACTCAGCAATATCTGAATGTTGAGGCTGAGAATTCCATATTGAGGGCTCAGATGGCGGAACTTAGCCACAGGCTACAATCACTAAACGATATCCTCATTTACATAAACACCAGCGCTGGGGTGTATGAAACGGATAGCTATCTTACAAGTGCGGAGAACTTCATGAGTATGCCCTATCTTAACCAACCCATTATGGCTTCTGCAGACATTTTTCAGTGGTGA 831 0.4392 MVTFVSGEPIGYSYTAWVAFQHDHRVDDYGVETVGLTKLRLQEAASALDSPLLDAYALGFGVRNLQLLLLSLKTFRGFMSPVLSEILRSGFMINSSLRRRTHLVQSFSVVFLYWFYKIACLVYIYLMDLYSGNSSMSTKFQSSGSEEDLQVLMDERKRKRMQSNRESAKRSRMRKQKHVDDLMGQVGELRKQNSKILTDINITTQQYLNVEAENSILRAQMAELSHRLQSLNDILIYINTSAGVYETDSYLTSAENFMSMPYLNQPIMASADIFQW 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0193 276 Coils Coil 207 234 - -
Glsi10g0193 276 FunFam BZIP transcription factor 154 206 - -
Glsi10g0193 276 CDD bZIP_plant_GBF1 157 207 IPR045314 GO:0003700|GO:0006355
Glsi10g0193 276 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 159 174 IPR004827 GO:0003700|GO:0006355
Glsi10g0193 276 SMART brlzneu 152 216 IPR004827 GO:0003700|GO:0006355
Glsi10g0193 276 MobiDBLite consensus disorder prediction 155 174 - -
Glsi10g0193 276 Gene3D - 154 236 - -
Glsi10g0193 276 SUPERFAMILY Leucine zipper domain 156 209 IPR046347 GO:0003700|GO:0006355
Glsi10g0193 276 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 217 IPR004827 GO:0003700|GO:0006355
Glsi10g0193 276 PANTHER BZIP TRANSCRIPTION FACTOR 44 139 272 - -
Glsi10g0193 276 Pfam bZIP transcription factor 156 206 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0193 Glsi-ChrGlsi10 1379422 1383753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0193 152 276 bZIP Transcription Factor Family AT4G34590 51.429 8.17e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0193 bZIP_1 4.7e-10 CL0018