Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0188 ATGTCTTTGAGCAAAGTGAGCCTAGTTGTACTAGCTTTCCTCTCGGCCACACTCTCCCAAGCTCACCCTGGTTGCAACTTCGGCTGGGGTGGTCATGGTGGAAATGGTCTTTATCCCGAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCCAAGAATCCCAGAATGGCTGCCTCTCTGCTTAGGCTTCACTTTCACGACTGCTTCGTGCAGGGCTGCGACGCATCAATTTTACTGGATGACAGCGCGACAATCGTAAGTGAAAAGAACTCTGGACCTAACAAAAATTCCATAAGAGGTTTTGAAGTGATTGATGAGATCAAGTCTAAGTTGGAAGAAGCATGTCCTGAGACTGTCTCCTGCGCAGACATTGTTGCCCTTGCTGCCAGGGGCTCCACTGTTTTAAGTGGAGGACCCAGCTGGGAGCTCCCATTGGGCAGGAGGGACTCAAAAACGGCAAGCTTAAGCGCCTCAAACAACAACATTCCCCCTCCAAATGCCACCATCGGAAACCTCCTAACATTCTTCAAGCGTCAGGGCCTTGATGAAGCAGACCTTGTTGCACTCTCAGGAGGGCATACCATTGGGGTGGCAAGCCCTGATATAAGACATAAAAAGCCCACTGGACTGCTAAAGCCCAAACAGATTTTCCGCAGAAAACACCCGCATCATTCTTCACCTTCGCTTATCGATGTACAAGTACCTGAAGTCTGA 747 0.49 MSLSKVSLVVLAFLSATLSQAHPGCNFGWGGHGGNGLYPEFYQFSCPQANDIVMSVLEKAIAKNPRMAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNSGPNKNSIRGFEVIDEIKSKLEEACPETVSCADIVALAARGSTVLSGGPSWELPLGRRDSKTASLSASNNNIPPPNATIGNLLTFFKRQGLDEADLVALSGGHTIGVASPDIRHKKPTGLLKPKQIFRRKHPHHSSPSLIDVQVPEV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0188 248 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 Pfam Peroxidase 55 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 CDD secretory_peroxidase 37 209 IPR033905 GO:0004601|GO:0042744
Glsi10g0188 248 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Glsi10g0188 248 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi10g0188 248 MobiDBLite consensus disorder prediction 229 248 - -
Glsi10g0188 248 ProSiteProfiles Plant heme peroxidase family profile. 36 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 SUPERFAMILY Heme-dependent peroxidases 37 210 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi10g0188 248 FunFam Peroxidase 40 183 - -
Glsi10g0188 248 Gene3D Peroxidase, domain 2 174 210 - -
Glsi10g0188 248 Gene3D - 41 173 - -
Glsi10g0188 248 PANTHER PEROXIDASE 72-RELATED 36 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0188 Glsi-ChrGlsi10 1358162 1360435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0188 1 234 Peroxidase AT1G44970 67.755 4.24e-116 334