Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0176 ATGAGGCTCACTGTGGACACGATCTGTCTGGTTGGTCGTGCCACCGAGGGCCACGTTTCAGGCATGGGAATTGAGGAGCGAAAGCAGGTGAAAAGGCCTGCCCAGGCTAGCTCACGAAAAGGGTGTATGAGAGGCAAAGGAGGCCCCGAAAATGCTAGTTGCACCTACAAAGGTGTCCGACAGAGAACTTGGGGAAAATGGGTTGCTGAAATCCGCGAACCCAATCGTGGGGCTCGCCTCTGGCTTGGCACTTTCGACACTTCCCACGAAGCTGCTTTGGCTTATGATTCCGCTGCACGTAAGCTTTACGGATCCGATGCCAAGCTCAATCTCCCCGACCTCTCTCTCAATTCTCATTCTCGGCCTCCCTCTGCCGCCACCCCCATTCCTCAAATCCCTAACCACCTCCCTCAGATCTCTTCTTTCAATACCAACTCTCAGCAAGTTGGACCCAGCATGTCTCTTCCCTTTAATACCGACAACACTGTGGCTGCGGAAAGCAACGCGAAGGAGGAGGAGCTTCGTCCATTTTGGGGGACGATGAACGAGGGGCTTTCAGAGTTTGACGATTCCATTTGGGCGGAAGCTGCCATGTCTCTGGATTTTCCAGTAATCGAAGATGCCGGGATGTACGCTTCTGGGAACTTGGGAGATGTGCCTGTTTGGGACTCTCCGCAAACTCCCTGGTGCATGTAA 696 0.5374 MRLTVDTICLVGRATEGHVSGMGIEERKQVKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAALAYDSAARKLYGSDAKLNLPDLSLNSHSRPPSAATPIPQIPNHLPQISSFNTNSQQVGPSMSLPFNTDNTVAAESNAKEEELRPFWGTMNEGLSEFDDSIWAEAAMSLDFPVIEDAGMYASGNLGDVPVWDSPQTPWCM 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0176 231 FunFam Ethylene-responsive transcription factor 2 54 113 - -
Glsi10g0176 231 SUPERFAMILY DNA-binding domain 55 113 IPR016177 GO:0003677
Glsi10g0176 231 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 Pfam AP2 domain 55 104 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 MobiDBLite consensus disorder prediction 25 50 - -
Glsi10g0176 231 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Glsi10g0176 231 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 CDD AP2 54 114 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Glsi10g0176 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 29 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0176 Glsi-ChrGlsi10 1308069 1308870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0176 31 228 AP2-EREBP Transcription Factor Family AT1G75490 53.202 4.69e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi10g0176 AP2 2.6e-15 CL0081