Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0173 ATGGAGTGGAGCCTGGTCATGAGAGAGTGGGTTCGTAAGATTCTCCTGTACACACAAAATCTAAATTTAGCTGTCAGGTGTGGAAATGCAATAAAGACCACAACTGGCCTTAATCAGGGAGGGCGATTGTGGGCCATATTTATTGCTTCTATACTCCTTCCTTCCACTATATTTATATCCCTGCTCTTTGCATCTGCTCCTCACTACTTTCACTACACACTTTATTTACTTGGCCAAGTTAAATCGTCTTGTCCAATGGCTGAATCAGGCTCAGCCGCTTCCAATAGAATGAGGTGCTCCATCCCCGAACGACTTCAGCTGCATGCGGCCATGCTGGCCCTGCAATTTGGCTACGCAGGGTTCCACGTGGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGGAACATTATTGCTTTGCTTCTGCTCCTTCCCTTTGCATACTTCTTAGAGAAGAAGGAGAGGCCTAGGATTACTCTAAACTTTCTCGTCCAGTTCTTTCTTCTGGCTCTCGTCGGGATTACAGCAAACCAAGGGTTCTACTTGCTTGGGTTGGACAACACATCGCCGACCTTTGCATCAGCAATACAGAACTCTGTCCCAGCCATTACTTTTCTCATGGCAGCCTTACTCAGGATAGAGCATGTGCGGTTGAACCGAAAAGATGGGTTGGCCAAGGTGATCGGAACCATATTCTGTGTAGCCGGGGCAACCGTGATCACTCTATACAAGGGTCCAACCATATACAGCCCATCTCCACCTCTACAGAGTAGGACTCCGCTATTTGCCTCACTGGGAGATGCCAAGGACAAGAACTGGACCCTCGGCTGCCTCTACCTCATCGGCCATTGCTTGTCCTGGTCTGGTTGGCTAGTCTTGCAAGCACCCGTCCTCAAGAAGTACCCAGCGCGTCTCTCTGTCACTTCATACACATGTTTCTTTGGACTCTTACAATTTCTGGTCATTGCTTTGATCGTTGAGAGGGACTCACAAGCTTGGGTATTCCACTCCGGTGGAGAAGTTTTTACAATATTATACGCGGGAGTGGTGGCATCCGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGTCCTGTGTTTGTTGCCGTGTATCAACCTGTTCAGACTCTAGTTGTCGCTATTATGGCTTCTCTTGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGTTGATCGTAGTGGGATTATACCTAGTGCTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCAAAGGAACAGATTGCAATTACGTCCACTCCGGAGCACAGCAGCAGCAGCAGGCCCGCATGCCACCCGAAAACTTCACTTACACAGCCACTCCTTCCTTCATCAACGGAAAATGTCTGA 1407 0.4847 MEWSLVMREWVRKILLYTQNLNLAVRCGNAIKTTTGLNQGGRLWAIFIASILLPSTIFISLLFASAPHYFHYTLYLLGQVKSSCPMAESGSAASNRMRCSIPERLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPRITLNFLVQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEHVRLNRKDGLAKVIGTIFCVAGATVITLYKGPTIYSPSPPLQSRTPLFASLGDAKDKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALIVERDSQAWVFHSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAKEQIAITSTPEHSSSSRPACHPKTSLTQPLLPSSTENV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0173 468 MobiDBLite consensus disorder prediction 437 468 - -
Glsi10g0173 468 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 251 - -
Glsi10g0173 468 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 424 - -
Glsi10g0173 468 Pfam EamA-like transporter family 282 420 IPR000620 GO:0016020
Glsi10g0173 468 Pfam EamA-like transporter family 111 248 IPR000620 GO:0016020
Glsi10g0173 468 PANTHER WAT1-RELATED PROTEIN 109 434 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0173 Glsi-ChrGlsi10 1291035 1294742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0173 89 468 Nodulin-like Gene Family AT1G75500 76.031 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0173 10 1291035 1294742 Glsi10g0173 10 1291035 1294742 ECH