Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0169 ATGGATCTGCTACGGTCGGAGGCTATGCAACTTGTACAATTTATCATTCCAACTGAATCAGCTCGCCGTGCCATCTCTTACCTCGGCGATCTCGGCCTCTTCCAGTTCAAAGATCTAAATGCAGAGAAAAGTCCATTCCAACGGACATATGCTGCTCAGATCAAAAGATGTGGGGAAATGGCACGTAAGCTTCGGTTCTTCAGGGAACAAATGACAAAGGCCAGTGTATCACCCTCAACAAGGACATCAGGCGAAAGTGAAGTTGATTTGGATAATTTGGAGGTTAAACTTTCAGAACTTGAAGCTGAGCTACTTGAGATCAATGTGAATAATGAGAAGTTGCAGCACAGTTACAATGAGCTATTAGAGTATAAACTCGTTCTACAGAAGGAGATGACAACAGATCCATCAAAGCAGATTAACCTGGGGTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATGGCATTTGAAATAATTTTATTTTGTGCTACTCGGGGTAATGTGTTTCTGAAGCAAGCGGTGGTTGAACATCTTGTTCTTGATCCTTTGTCAGGAGAGCAGGTGTCAGGAAGACTTTCTGAATTGAAGACTACCATTGATGTTGGGTTGTTGCACAAGAGCACTCTATTGCAGACAATTGGATATTACTTTGAGCAGTGGAACCTTCTGGTGAAGAAGGAAAAATCCATTTTCCACACTTTAAATATGCTTAGCATTGATGTGACAAAGAAATGTCTTGCCGCAGAAGGTTGGTGTCCTGTTTTAGCAACAACTCGGATTTGTTCTTGA 792 0.4179 MDLLRSEAMQLVQFIIPTESARRAISYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMARKLRFFREQMTKASVSPSTRTSGESEVDLDNLEVKLSELEAELLEINVNNEKLQHSYNELLEYKLVLQKEMTTDPSKQINLGFISGLVPREKSMAFEIILFCATRGNVFLKQAVVEHLVLDPLSGEQVSGRLSELKTTIDVGLLHKSTLLQTIGYYFEQWNLLVKKEKSIFHTLNMLSIDVTKKCLAAEGWCPVLATTRICS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0169 263 Coils Coil 83 117 - -
Glsi10g0169 263 Pfam V-type ATPase 116kDa subunit family 27 131 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi10g0169 263 Pfam V-type ATPase 116kDa subunit family 187 261 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi10g0169 263 PANTHER VACUOLAR PROTON ATPASES 187 261 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi10g0169 263 SUPERFAMILY Intermediate filament protein, coiled coil region 84 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0169 Glsi-ChrGlsi10 1251441 1254650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0169 1 261 Primary Pumps ATPases(2) AT4G39080 53.936 1.47e-115 348