Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0160 ATGGAAATTGGTGTTGATTCGGATGATGACGAGCCCATTGGGTCTATATTTAAGCTGAGGAGGCCACGTAACTCCAAGAAGGTTAGCTCGGGATTAGAGGGCACTGGTGATGGAGTCCAGAATGCTGAGGCTACCAGGAAGAAATTGGTTGCTGCAGAAGAGGATTCAGGGGGTATGGATGATACCTTGGCTAGTTTTAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCAGGGATCTGGAACCACCAGAGGAAGAATTTCTTCTTCGAAGGTGTTTGCTGATAGTCCTTTGAATGTTTCTCTCAAGGATGGGGTTCTGGATAAAAACAAGATATTGAATAATGTCAAAGAAGGGCAGGCTGTTGGTGAAAAGGGATCTGATATGACTGTGGATATAAAAGTCACTGGCAGCAGTCAAGGAAAAATAGTTAGATCTCATATGGATCTGGCACTGAAGGGAATTGAGGGTCGTGCTACATCTGATGACGATTTGGTAGCTGGAGAATCTGGGAGTATGTTAAATGATGAGAAAGGGGTGGTTTTGTTGCCTGGCAATGGTTTGCAACACCCTTCTGATGAACATAAGGAAGACTCATTGTCAGCGATTATCCAAAATGCACAATTTAATTTAATTAGGAAATCTTCTACCTCTTCAAGTCCAAAGCAGAAAAGTCAGGGTAATATTGTGGATGACAGGTTGCAAAGTTTTCCAGAAACCGTAGAGTCTGTGGCTGAATGTAGATCCAAATCTGCTTCTGCCTCAAAATGGGGCAGGGGAATTATGAAATCTGGGAATGATATGCCTCAAGGATCTGATTTGCGTTCATTTGCTTCAGCATCTGCAATGGATAATCAAAAGTTTTATGGTGGCTATCTTCAAGAGGAAATTGCCGAGGGCATTAGTGATTCAAACATTCAAGATGAACTGGCAGTTGATCCCTTTCTCTCGACCAATGTCTGCAATGGAGATAGCCAGCAAGTGTCTTTTGTTCAATTTGGAGATGTTTCTTCTCCTTCCCACCAAAAGGTTACATTTCAAGAAGGAATTGTCAGTGATGGTTTAAAGCATTGTTCTACCATATTATGTGGTGTTGAAGAAATGGTTGACACTGCCTCACTCTCAAAAATGAGGGAAGGGGTATGTGGCTTTGGAGCGGGTGAGTTCAAGAAAAGTTTAACGGATGAACTGGCTCAAGTGTGTAATGGTAGTACAGAAAATGATGTTTTTACTTCCATAGAGAGAGTAAAAGAAATCACCTTACCTCCTCCAGATACCCATCCCTTTAATAAATTGAGTGAAAATTTACCGAATAAGAATAATCAACTGGTTTCTGGAAAAAATTTGGAGGCATACTCCAAAAATGGAGCTCTACATGCAAAGGTAGATGGTGGTATGATATCTGAAACTGAGTTGGTTTTTGGTAGAATTTGCAGCGATTGTAATAGTGTAGATACAAAGGCTAAACTGCAAGATCTTGTTTCAGGTTTTTCATTGGAAAATGCTGTAATCTCTAATGATAGTTTTCCTCCAATGATGTCTAATGAAGCCAATGATAACGAGTTGGCTGTCAAATCAACTCACCCAGAAAAACCTTCTGAAACCTGTATTATTCCAAATGATTCTGTTGCTTCCATTCATAAATGCAGCTCAGTAGTGCATCCTAGTGAAAATTCTAATGGTACATCTGAAGAGGGAGCTCTTGCAAATGTTGATAGTCTCTATTTCAAGAAAGAAGCTGATGGAACCTCTCCTCCATCTGCAATTCCTGAGGAAAATGAGAATCACATAGAATATGCTGTTTCTGGGTCTGATTTTGCCAACAAAGATGATAGTATGTCAGCTGTTCAGCGTGCCATGCGTAAGGTCAAAAAGCGTAGGCATGGAGACATGGCTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATAACCAATCTTTTCTTGATAGCCAAGGTGTTGTAGATGGTGACCGCAATCTCAGACCAAGAGTGAAGTTTGATTCCTCTTTGAATGTTGTTGAAGAGTCTGAAAGTGTTGCAGCAGCAGTATCAGCTGGGCTGAAAGCCCATGCAGCTAGTCCAGTTGAAAAGATAAGGTTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCCAGGACTATTTGGATTGCAGAAATCAGATTTTAAGTCTTTGGAGCAGAGATGTCACACGTATTCTGCCTCTTTCTGACTGTGGAGTTAGTGATTCTCCTTCTGAGGATGAATCTCCTCACTCTTCTGTTATTAGGGAAGTCTATGCATTTCTCGATCAATGTGGCTATATAAATGTTGGGATTGCCTCTCAGAAAAATGCCGGAACCAGTGCAGGGCATAGTTATAAACTCATAAAGGAAAAGGGATTTGACGACAGTTCCACGGCCTCCATGGCTGACTCTGAAGATGGAGTTTCCTTCATTGTAGGTCAGGCTAAAAGGTCTGATACTTTCATGGAGATTAAGGATGGCCTTAAAGTTGATTGTGAAAACTTGGCACCTGTAGCTACAGAAGGCAGGAGGTATGGTGACCCAGTGATGTTGAATGTATCAAACATTATGCAGCATGAAGAAAAAAAAATTGATGATTCCCAAGAAAATGGTGGGATTAAGGTGGGTTTAAGTGGACTCATACATATGAATATTAATAGTTCAGAACCTTCTTCGAAGATTTCTGATAGCGGAATGACTTCTATTGTATCTTTTGAGCGGAACAACAAATCTACCTGTGTTAAATCAACCTTAGATGATCAGATAGCTGATCCTTTGCAATCTGATTCGGAGGATAGAAAGAGAGTGATTGTCATAGGAGCTGGTCCAGCTGGGTTAACTGCTGCTCGCCACATGCAACGACAAGGTTTTTCTGTGACTGTACTCGAGGCTAGGAGTAGAATAGGTGGTCGTGTATTTACTGACCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGCGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCATCATTGGTTTGTGCTCAGTTGGGCCTTGAGTTGACTGTGCTAAACAGTGACTGTCCTCTTTATGACATAGTAACAAGGCAAAAGGTTCCTGCAGACCTGGATGAAGCACTGGAAGCTGAATATAATAGTCTTCTTGATGACATGGTACTGCTTGTCGCCCAGAAGGGTGAACAAGCAATGAAAATGTCCCTTGAAGATGGTTTAGAATATGCTCTTATGAGGCGTCATATGTCACGCTCTGGGAGAAGTAGTGAAGAAATTGATCAAAAATTTCTTTCAGATGTGTCATTCAATTCCAAAGGAGGCAGTGCTGAGGAAAACAATACTGAAGAGGAAATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTAATTTGGAGTATGGTTGTGCTGCTCTGCTTAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTACGGGGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGCTACAGTACTGTCATTGAGTCTCTAGGAGAAGGGCTTGTCATTCACTTGAACCATGTTGTAACAAATGTGTCATATTGTAGCAAGGAACCTGGCCAGAGTAATATAGTCAGAGTTTCTACATCAAATGGCAATGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTGGGCTGTTTGAAGGCTGAAACTATAAAATTCTCCCCACCTCTGCCACTGTGGAAATATTCTTCTATACAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTCATGTGTTTTGGGATGATGCAGTGGACTACTTTGGAGCAACAGCGGAGGAAACAAGCAGAAGAGGTCATTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTACTCATAGCGTTAGTTGTTGGTAAGGCAGCAATAGATGGTCAATGTTTGAGCTCCTCTGACCATGTCAACCATGCATTAATAGTTCTCCGTAAACTTTTTGGGGAGGCTTCTGTACCTGATCCCATTGCATGTGTAGTGACTGATTGGGGTAGGGATCCTTATAGCTATGGTGCTTACTCATATGTTGCTGTTGGAGCATCAGGAGAAGACTACGATATATTAGGGAGGCCAGTTGATAACTGCTTGTTTTTTGCTGGTGAGGCAACATGCAAAGAGCATCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGGGAGGCTGTGCGAATAATTGACATATTGAGCACTGGAAATGATTATACTGCAGAAGTGGAGGCAATGGAGGCAGCACAAAGACAGTCAGATACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTTGATGCGGTAGAGCATGTCTTGTACAAGAACTCTTATGATGGTGCTCAAATCTTAACTCGTGAAACTTTACTAAGGGACATGTTCCTTAATGTGAAAACCAGTGCTGGGCGCTTGCATGTGGCCAAACAGTTGTTGAGTCTTCCTGTTGAAAACTTGAGGTCCTTCGCTGGGAGTAAAGAGGGGCTTACCATTCTTAACTCATGGATTCTGGACTCAATGGGGAAGGATGGGACCCAACTCTTGCGGCACTGTGTGCGTCTCCTTGTGCGTGTTTCGACTGATCTGCTTGCTGTACGCTTATCAGGCATAGGGAAAACGGTGAAGGAAAAAGTTTGTGTACATACCAGCCGTGATATACGTGCTATAGCGAGCCAGTTGGTTAGTGTATGGCTTGAAATCTTCCGCAAGGAAAAAGCTTCTAATAGTGGATTAAAGTTTTCAAGACAAGCAACTGCAGCTGATTTATCAAAGAGAAAGTCTCTGAAAGATTCAGCCTCAGGAAAGCCACCTTTGACGCATTATGGTGCTTTTGAGAATAAAGGAGGTTCGCTGGCTTCTGCATCTGCAGGAAGCAGTTCACCTTCGATTGCAAATGTGAAGAATTTGCACAGCAAACAAGTAAGACAAGTGGCAAATGACTCAGGGCATGGAGTCAGTTCTTCCAGGTCCCAAGGTTCAGTTGGAAAAGTAGTTACCAAGGAGGAGGATAACCACTATGCTATGTCTGAAGAAGAACATGCTGCTGTAGCTGCAGCAGAAGCTGCCCGTGCTAAAGCGCTTGCTGCTGCTGAGGCTTATGCCTCCGCAGAAGCCAGGTGCAATACAATGCTGCAGCTTCCAAAGATACCTTCATTCCATAAATTTGCTAGACGGGAGCATTATTTACAAAATGATGAGTATGATAGTAGGAAAAAGTGGTCTGGTGGTGTTTTAGGAAGGCAAGATTGTATTTCGGAGATAGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCCTGTGTTAACCTTGATAATGCCAGAATGTCTGTGGATAACCTATCACAGCGGAGTCATTCTAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTCTGGACAACACTATATATACAAAAGCATGGATTGACACAGCTAGTGGTGTGGGGATAAAAGACTATCATGCCATTGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTGATTTTTCAAATCCAACCATACTTTTAAAGGACGAGGAAGAATCAAATGCCTGTTCAAGATTACCCAGCAGGAAGTATGATGGTATGGCAAATGAGAGCTCCATTTCACAGGTTACTGTAAATAAGGAGGCCTTAAAAAGTCATCCTCGGGCAGATCGCATTAAACAGGCTGTTGTGGATTATGTCGCATCACTGCTTATGCCCCTTTATAAGGCAAGGAAACTAGATAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACCAAGGTAATGGAGCAAGCCACAGATGCAGAGAAAGCCATGGCTGTTCATGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGACAAATTGATTGAGAGACACATGGCAATGAAACCAGTTGTAAAATCTTAA 6003 0.4248 MEIGVDSDDDEPIGSIFKLRRPRNSKKVSSGLEGTGDGVQNAEATRKKLVAAEEDSGGMDDTLASFRKRLKGPKRDQGSGTTRGRISSSKVFADSPLNVSLKDGVLDKNKILNNVKEGQAVGEKGSDMTVDIKVTGSSQGKIVRSHMDLALKGIEGRATSDDDLVAGESGSMLNDEKGVVLLPGNGLQHPSDEHKEDSLSAIIQNAQFNLIRKSSTSSSPKQKSQGNIVDDRLQSFPETVESVAECRSKSASASKWGRGIMKSGNDMPQGSDLRSFASASAMDNQKFYGGYLQEEIAEGISDSNIQDELAVDPFLSTNVCNGDSQQVSFVQFGDVSSPSHQKVTFQEGIVSDGLKHCSTILCGVEEMVDTASLSKMREGVCGFGAGEFKKSLTDELAQVCNGSTENDVFTSIERVKEITLPPPDTHPFNKLSENLPNKNNQLVSGKNLEAYSKNGALHAKVDGGMISETELVFGRICSDCNSVDTKAKLQDLVSGFSLENAVISNDSFPPMMSNEANDNELAVKSTHPEKPSETCIIPNDSVASIHKCSSVVHPSENSNGTSEEGALANVDSLYFKKEADGTSPPSAIPEENENHIEYAVSGSDFANKDDSMSAVQRAMRKVKKRRHGDMAYEGDADWEILINNQSFLDSQGVVDGDRNLRPRVKFDSSLNVVEESESVAAAVSAGLKAHAASPVEKIRFKEILKRKGGLQDYLDCRNQILSLWSRDVTRILPLSDCGVSDSPSEDESPHSSVIREVYAFLDQCGYINVGIASQKNAGTSAGHSYKLIKEKGFDDSSTASMADSEDGVSFIVGQAKRSDTFMEIKDGLKVDCENLAPVATEGRRYGDPVMLNVSNIMQHEEKKIDDSQENGGIKVGLSGLIHMNINSSEPSSKISDSGMTSIVSFERNNKSTCVKSTLDDQIADPLQSDSEDRKRVIVIGAGPAGLTAARHMQRQGFSVTVLEARSRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDIVTRQKVPADLDEALEAEYNSLLDDMVLLVAQKGEQAMKMSLEDGLEYALMRRHMSRSGRSSEEIDQKFLSDVSFNSKGGSAEENNTEEEILSPLERRVMDWHFANLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGEGLVIHLNHVVTNVSYCSKEPGQSNIVRVSTSNGNDFFGDAVLITVPLGCLKAETIKFSPPLPLWKYSSIQRLGFGVLNKVILEFPHVFWDDAVDYFGATAEETSRRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQCLSSSDHVNHALIVLRKLFGEASVPDPIACVVTDWGRDPYSYGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYTAEVEAMEAAQRQSDTERDEVRDIIKRLDAVEHVLYKNSYDGAQILTRETLLRDMFLNVKTSAGRLHVAKQLLSLPVENLRSFAGSKEGLTILNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKEKASNSGLKFSRQATAADLSKRKSLKDSASGKPPLTHYGAFENKGGSLASASAGSSSPSIANVKNLHSKQVRQVANDSGHGVSSSRSQGSVGKVVTKEEDNHYAMSEEEHAAVAAAEAARAKALAAAEAYASAEARCNTMLQLPKIPSFHKFARREHYLQNDEYDSRKKWSGGVLGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNARMSVDNLSQRSHSNEIASHLNFREHSGESVALDNTIYTKAWIDTASGVGIKDYHAIERWQSQAAAADSDFSNPTILLKDEEESNACSRLPSRKYDGMANESSISQVTVNKEALKSHPRADRIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVHEFLDFKRKNKIRSFVDKLIERHMAMKPVVKS 2000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0160 2000 SUPERFAMILY FAD-linked reductases, C-terminal domain 1253 1364 - -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 212 232 - -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 1657 1680 - -
Glsi10g0160 2000 Gene3D - 936 1413 IPR036188 -
Glsi10g0160 2000 PANTHER FLAVIN MONOAMINE OXIDASE 934 1422 - -
Glsi10g0160 2000 Gene3D - 1042 1370 - -
Glsi10g0160 2000 PRINTS Adrenodoxin reductase family signature 935 957 - -
Glsi10g0160 2000 PRINTS Adrenodoxin reductase family signature 958 971 - -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 47 78 - -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 212 233 - -
Glsi10g0160 2000 Pfam SWIRM domain 688 768 IPR007526 GO:0005515
Glsi10g0160 2000 Pfam Flavin containing amine oxidoreductase 944 1415 IPR002937 GO:0016491
Glsi10g0160 2000 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1511 1595 IPR035441 -
Glsi10g0160 2000 Gene3D - 677 780 IPR036388 -
Glsi10g0160 2000 SUPERFAMILY Homeodomain-like 678 773 IPR009057 -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 1657 1682 - -
Glsi10g0160 2000 Coils Coil 1431 1451 - -
Glsi10g0160 2000 MobiDBLite consensus disorder prediction 1 89 - -
Glsi10g0160 2000 SUPERFAMILY FAD/NAD(P)-binding domain 933 1417 IPR036188 -
Glsi10g0160 2000 ProSiteProfiles SWIRM domain profile. 678 778 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0160 Glsi-ChrGlsi10 1176509 1187662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Glsi10g0160 Amino_oxidase 1e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0160 10 1176509 1187662 Glsi10g0160 10 1176509 1187662 ECH