Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0158 ATGACTTCACTTGTTGTCTTTCCTTTACTGTTACACATTCTCGTCGCCACCGTACCTTTTCTAACCCAAGCCGGCGGTGGCCAGTGGCAGATGCTACAGAAAAGCATCGGCATTGTGGGCATGCACATGCAGTTAATGCACGACGACCGCGTCGTCATTTTCGACCGCACCGACTTTGGCTTATCCAACTTATCATTGCCTCATGGGAAATGCCGCCACGACCCAAAGGAGATAGTTGTTAAAATTGACTGCACTGCTCACTCCATCGAGTACGACGTCACATCCAATACTCTCCGGGCTCTATTCGTCCAGACTGATGTCTGGTGTTCATCCGGCTCCGTTAACTCTGACGGCCGTCTGATCCAGACCGGTGGATTCAACGACGGAGACCGTACGGTCAGGATATACAATCCTTGTCCCACCTGTGACTGGCAAGAACTGGATGGGGGACTCGCAGCTCGTCGATGGTACGCCACCAATCACATTCTGCCAGATGGACGGCAGATTATCATCGGTGGAAGAAGGGAATTCAACTATGAATTTTACCCCAAAACAGAAGCAGCTAAAAACACTTACAGTCTGCCGTTTCTGGTTCAGACCAATGATCCCGGTGCAGAGAACAACTTGTACCCCTTTGTTTTTCTGAACGTGGACGGCAACCTGTTCATCTTTGCCAACAATCGAGCTATCTTGTTCGACTACACTAAGAACAACGTGGTCAGGACATACCCACAAATACCCGGAGGAGATCCAAGGTGTTATCCAAGCACAGGTTCCGCGGTTTTGCTACCTTTGAAGAATTTACAAGCGCCGTCTATTGAAGCGGAGGTTTTAATTTGTGGTGGAGCCCCGAGAGGATCTTTTCAACAGACTAGGAAAGGCAAATTTCTGGAAGCCTTGAATACCTGCGCTCGGATCAAAATCACTGACCCTAACCCACGGTGGGTCATGGAGACAATGCCTGGAGCTAGAGTGATGAATGACATGATCATACTCCCAAACGGCAACGTTTTGATAATCAACGGGGCAACTTTAGGGACGGCCGGATGGGAAGTGGGGCGGAATCCGGTGTTGAGCCCGTATCTTTATAAAGTGAATGGCCCGTCCGGGTCCCGGTTCGAATTGCAAAACCCGTCCAATATTCCCCGGATGTACCACTCCACAGCAGTTTTGCTTCGAGACGGTCGCGTGCTTGTGGCAGGCAGCAATCCCCACACATACTACAATTTCACTAATGTGTTATTTCCAACGGAGCTGAGGTTAGAGGCGTATTCTCCTTCGTATTTGGAGGCTGCGTTTTTAAACCTTCGTCCAGAAATCCTATCTCCCCGTTCTCAAACCAAGCTCACGTATGCTCAGAAGTTGATGTTGCGATTCCGAGTGACAGCAACGTTGGCTCAAAATTTGGTGTCGGTGACGATGTTGGCGCCGCCTTTTAACACGCACTCATTCTCCATGAACCAGAGGCTGTTGGTTCTGGAGTCAACCAAGGTGAGCAATTTGGGGAAATTAACGTACCAAGTTGAGGTCACCACACCCGGTTCGCCCATCCTAGCACCACCCGGTTTCTATCTACTATTTGTGGTTCATCAAGAAATTCCTAGCCAGGGTATTTGGGTCAAAATACTATGA 1632 0.4939 MTSLVVFPLLLHILVATVPFLTQAGGGQWQMLQKSIGIVGMHMQLMHDDRVVIFDRTDFGLSNLSLPHGKCRHDPKEIVVKIDCTAHSIEYDVTSNTLRALFVQTDVWCSSGSVNSDGRLIQTGGFNDGDRTVRIYNPCPTCDWQELDGGLAARRWYATNHILPDGRQIIIGGRREFNYEFYPKTEAAKNTYSLPFLVQTNDPGAENNLYPFVFLNVDGNLFIFANNRAILFDYTKNNVVRTYPQIPGGDPRCYPSTGSAVLLPLKNLQAPSIEAEVLICGGAPRGSFQQTRKGKFLEALNTCARIKITDPNPRWVMETMPGARVMNDMIILPNGNVLIINGATLGTAGWEVGRNPVLSPYLYKVNGPSGSRFELQNPSNIPRMYHSTAVLLRDGRVLVAGSNPHTYYNFTNVLFPTELRLEAYSPSYLEAAFLNLRPEILSPRSQTKLTYAQKLMLRFRVTATLAQNLVSVTMLAPPFNTHSFSMNQRLLVLESTKVSNLGKLTYQVEVTTPGSPILAPPGFYLLFVVHQEIPSQGIWVKIL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0158 543 Gene3D Immunoglobulins 436 543 IPR013783 -
Glsi10g0158 543 Pfam Galactose oxidase-like, Early set domain 437 542 IPR015202 -
Glsi10g0158 543 SUPERFAMILY E set domains 435 542 IPR014756 -
Glsi10g0158 543 CDD E_set_GO_C 433 542 IPR015202 -
Glsi10g0158 543 PANTHER SECRETED PROTEIN-RELATED 10 542 - -
Glsi10g0158 543 FunFam Aldehyde oxidase GLOX 23 435 - -
Glsi10g0158 543 Pfam Glyoxal oxidase N-terminus 41 282 IPR009880 -
Glsi10g0158 543 Gene3D - 23 432 IPR037293 -
Glsi10g0158 543 SUPERFAMILY Galactose oxidase, central domain 88 430 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0158 Glsi-ChrGlsi10 1158693 1160324 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2008 08 14169990 14171627 Glsi10g0158 10 1158693 1160324 CCT
Glsi10g0158 10 1158693 1160324 Glsi10g0158 10 1158693 1160324 ECH