Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0153 ATGGAAGGGTTTGATCCTGCTAGCACTGTTGTTGCTGGTGTACAACCAATTAGTTCTGCATTTGGTTCCTCCTCGGGAGCAACTCCAAGACCACAGAACCGATTGAATGCTCCCAATTTCAATGCCTCTCAAATGGGTGCTTCTGCGCTTCTGTTACAGCAAAATAGGACTCTTGAGAACCTAAAACCTGGTATACCTCCATCCCACCCCAATATGCCACCTTCAGCGCCCTATCTTCAAACTGTGGACTCCCAATCGGCTTCCCATCTATTACGTTCTCCGAATATGAGACCGCGGTCTTCCCATTCCAGGTCTTTGTCTCAACCATCCCATTTTTCGTTGGATTGCTTACCCCCGTTGAGTCCTTCACCTTATCGTGAGCCCTCGCCCTCGCCGACCCTCCTTTCTGACTCGATTTCCACAGATGTGTCTATGGAAGAAAATGTGGTTGACTCTCATGCCCCTTCCATTTCTTTGCCAGTCAATAGGGATCACGCCTTTCAGGTTGGTCACAGTCTTCTTTCTCGTAAAGGACACAGGCGCTCTAGCAGTGATACTCCATCAGCAATCTCTGGCTTTATTCAATCTTCTCCTCCTTTGGTTCCCTCTGCGACTTGGAAGGATCTGGACAGTTCAGTTTCTAGAAGAGAAACCTCAGGTTTTGAGAAGCCCATTCGGTTGGTGAAAAAGGAGCAAAAGAAGGATGAGGGCCATGTTGATTGCTACGATGCAAAACTTACGATTGAGAGGAAAGAAGATGTCATGGATGATTTAATTAGTGTGTATATGAATTTGGAGAACATTGATATTCTGAACTTATCTGGTGTGGAAGATTCGAAGACAGTTGAAAGCAGTGATAATGAAGTTGAGAGTCATGTAATTGGAAAAACAATCACGACACAGGGGACGTCTTCGAGCTGCGCGGAAGAAAGAAGGGAAGGAATCAAGAGGAGTTCTAATGGAGACATTGCACCAGGTGCCCGACATCGAAGAAGTTTCTCATTGGATAGTTCTATAGGAAATTTGCATATTGAAGATGAATCACCAAAACTTCCTCCTTTAGGGAATCTAGCTGGTCAACGCTCGCCTATTGATTCAGTAGATGGTAAAACATCTGAAATCAACATGGAGTTTAGAAATGGTGAATTCAGTGAAGTGGAGCTAAAAAAAATAGTGGTAAGCGAGAAACTTGCTGAGATTGCCTCGTCAGATCCCAAGCGTGCAAAAAGGATATTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGCGTAAGGTGCGGTACATTGCTGAATTGGAGCAAACGGTTCAAACTCTTCTGACAAAGACAACCACAATGTCTACTCAATTTACCAAATTACAGTGTGATAATTCGGAGCTTAAAAGTGAGAACAATGAGTTGAAATTCAGGCTTCAAGCCATGGAACAGCAGTCCCAACTGAAAGATGCTCTGAACGAGACCTTAACCGCTGAAGTCCAGCGTTTGAGGCTCACAGTCACGGAACTTGGTGGAGAGTCCATTCTGGCGAGTTGCATGGCTCGCCAGCTTGCTATCAACCAACAAAGGTTACAATTACAACATCAGCAGTCTAGCCAGCTTAAACAATCACAATTGCAAAATCACCATTCTCAGAAACAGACACAGACTCAGTCACACCAGATTCAACATGATGAATTGCATCAACCGCAGCATGAAAAAGCAACTGCCTACTAA 1713 0.4466 MEGFDPASTVVAGVQPISSAFGSSSGATPRPQNRLNAPNFNASQMGASALLLQQNRTLENLKPGIPPSHPNMPPSAPYLQTVDSQSASHLLRSPNMRPRSSHSRSLSQPSHFSLDCLPPLSPSPYREPSPSPTLLSDSISTDVSMEENVVDSHAPSISLPVNRDHAFQVGHSLLSRKGHRRSSSDTPSAISGFIQSSPPLVPSATWKDLDSSVSRRETSGFEKPIRLVKKEQKKDEGHVDCYDAKLTIERKEDVMDDLISVYMNLENIDILNLSGVEDSKTVESSDNEVESHVIGKTITTQGTSSSCAEERREGIKRSSNGDIAPGARHRRSFSLDSSIGNLHIEDESPKLPPLGNLAGQRSPIDSVDGKTSEINMEFRNGEFSEVELKKIVVSEKLAEIASSDPKRAKRILANRQSAARSKERKVRYIAELEQTVQTLLTKTTTMSTQFTKLQCDNSELKSENNELKFRLQAMEQQSQLKDALNETLTAEVQRLRLTVTELGGESILASCMARQLAINQQRLQLQHQQSSQLKQSQLQNHHSQKQTQTQSHQIQHDELHQPQHEKATAY 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0153 570 MobiDBLite consensus disorder prediction 529 556 - -
Glsi10g0153 570 MobiDBLite consensus disorder prediction 75 114 - -
Glsi10g0153 570 MobiDBLite consensus disorder prediction 15 42 - -
Glsi10g0153 570 Gene3D - 405 503 - -
Glsi10g0153 570 SMART brlzneu 402 466 IPR004827 GO:0003700|GO:0006355
Glsi10g0153 570 Coils Coil 457 477 - -
Glsi10g0153 570 CDD bZIP_plant_RF2 407 457 IPR044759 GO:0003700|GO:0006355
Glsi10g0153 570 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 404 467 IPR004827 GO:0003700|GO:0006355
Glsi10g0153 570 Pfam bZIP transcription factor 406 464 IPR004827 GO:0003700|GO:0006355
Glsi10g0153 570 MobiDBLite consensus disorder prediction 300 328 - -
Glsi10g0153 570 MobiDBLite consensus disorder prediction 346 368 - -
Glsi10g0153 570 MobiDBLite consensus disorder prediction 529 570 - -
Glsi10g0153 570 SUPERFAMILY Leucine zipper domain 406 456 IPR046347 GO:0003700|GO:0006355
Glsi10g0153 570 MobiDBLite consensus disorder prediction 175 194 - -
Glsi10g0153 570 MobiDBLite consensus disorder prediction 60 138 - -
Glsi10g0153 570 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 111 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0153 Glsi-ChrGlsi10 1140771 1145619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0153 14 501 bZIP Transcription Factor Family AT4G38900 44.808 2.19e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0153 bZIP_1 2.1e-08 CL0018