Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0146 ATGTCAGCCTCTGAACGCGTGACGTCGGATGTTCACTACTTCTCCTCGACAACCGTGTTGATAGGAAAGATTGAAGCAGGGAAAATGTCTCCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTTAGGCTGCGCCAAATGCTGCGACGGTGGCGCAACAAGGCCCGCATGTCAGCCAATCGCATACCGTCTGATGTGCCCGCTGGACATGTCGCCGTCTGCGTGGGCACCAACTATAGGAGATTTGTGGTGCGCGCCTCCTACCTCAACCACCCCGTCTTCAAGAAACTACTGGTTCAAGCAGAGGAAGAGTACGGGTTCTCTAATCACGGTCCCCTGGCGATTCCATGCGAGGAAGCCGTGTTCGAAGAGGTGCTCCGATTTATTTCACGATCGGAGTCGGGGAAGTCGACCCGATTCGTGAACCTGGAGGACTTTCACAGGCACTGCCACGTGGGCATCCGGAGCAATCTGGAATTGTGGCCAGAATCTCGACCGTTGCTTCATGGGATCACTGAAAATACTATCTGGTAG 537 0.5419 MSASERVTSDVHYFSSTTVLIGKIEAGKMSPGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTNYRRFVVRASYLNHPVFKKLLVQAEEEYGFSNHGPLAIPCEEAVFEEVLRFISRSESGKSTRFVNLEDFHRHCHVGIRSNLELWPESRPLLHGITENTIW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0146 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 126 IPR003676 GO:0009733
Glsi10g0146 178 Pfam Auxin responsive protein 44 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0146 Glsi-ChrGlsi10 1071444 1073908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0146 33 177 Calmodulin-binding Proteins AT4G34750 53.289 2.32e-49 155