Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0145 ATGGACCGGCGCTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGCTTGAGAAAGCAGTTGCTGCATTGGACTCCGCTGGTGCTTCCTCTCAAGGCAATGGCAATCAGGATAACTACAAAAAGCCAAACTATGTCCAAATTTCTGTGGAGTCATATTCACACCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCACACACTGGAGGATGAGATCAAGGAATTGCGTGATAAGCTGTCAGCAGCAAATTCAGAGATGACTACGAAGGAAAACCTAGTAAAACAACATGCTAAAGTAGCCGAAGAAGCTGTCTCGGGCTGGGAAAAGGCTGAAGCGGAAGCTTTATCATTGAAGAATCATCTAGAATCTGTCACTCTTTCAAAGCTCACTGCTGAGGATCGTGCATCACATTTAGATGGCGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTTTCTAAAACCAAGCAATTAGACAAGATTAAGGGCGAACTTGAGGCAAAGATAGTTAACTTAGAACAGGAACTCCTTAGGTCAGCTGCTGAAAATGGAGCGCTTTCAAGGTCCTTGCAGGAGCGCTCTAGCATGCTAATGAAAATAAGCGAAGAAAAAGCTCAGGCTGAGGCTGACATTGAGCTTCTGAAGAGCAACATAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAATATGAGTATTAGGTCTGCGGAAGCAGCCAACAAACAGCATATGGAGGGTGTCAAAAAAATTGCCAAGTTAGAGGCGGAGTGCCAAAGATTACGTGGTCTAGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCTCAGATGAAGCTAGAAGTTGAGAATCTAGGCCGAGATTATGGAGAAAGTCGATTAAGGAAATCTCCTGTCAAGTCTGTTAGTCCTCATCTGTCTCCTTTGCCTGAGTTCTCCATAGAGAACGTACAGAAATTCCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTAGTAATGGAAGAAGAAACTAAGATGCTCAAAGAAGCTTTGGCTAAACGTAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCAAAAACCCTGAGCAAACTTCAAAGTTTGGAAGCATATAACCAGCAGAAAGGATCTCCAAAATCCATCGTCAGGATGACGCACGAAAGTATTTATAGTCAAAATGCAAGCAATGCACCAAGCGTAGTCTCCATGTCTGAAGATGGAAACGATGATGTGGGAAGTTGTGCCGACTCTTGGGCTACAGCATTGATCTCTGAGCTATCCCAATTCCGAAAGGAAAAGAATACTGAGAAATCAAGCAAGCCTGAAGCCACTAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTTGAGAAGTTGGCTCGTCTATCAAATGATTCCGATGGAGATGCTTCTGTTTCAGTTTCTTCGAACAATAAGACATCTGAAATTGTGACCAATGATGTATCAGATGTCAATACTGGCAAAGATGATTCTTCTGAGAAGCAGATTGATACAAATCCACTGCCAAATCAGGTGTTTTCTGGTGGAGTGTTGTCTGCACCCGAACCTGGATCTGATGTTGATGACTTCTCCTTGACAGATCTTCGATCAAGAATATTGTTGGTTTTTGAGTCAATGTCTAAGGATGCTCATAAAGGAAAGATCCTGGAGGATATTAAACATATTCTTGAGGATTCACGTGACACTTGTGTTCAGCATTCTGTAGGTTGCTTTCCTCAGGATGTCCAGCAACTCCAGCCTTCTGATTCTCCATGTGATAGGCAGGTTCATCCTGAAGATGCTGGCTTAAGTCTTGAAAAGGATGCCACTTTGTCCAAGCAAGCAACAGAATGTGTGCAGATAACTTCATATTTGGAAGCTGCAATTTCTCAGATTCACGACTTTGTATTGATCCTTGGCAGAGAAGCAATGGCAGTACACGACATATCTTCTAATGGAGATGGAATGAGCCAAAAGATTGAGGAGTTCTCTGTCACCTTTAATAAAGTTCTATGCAACAAAGCAAGTTTATCACAGTTTGTTCTTGAGCTGTCTTATGTTTTAGCTAAAGTGAGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATAGACAAGATTGCGTTGCCAGAAAATAAGTTAGTTCAAGATAATTCAACAGGAGAAAGATATCAAATCGGTTGTTCCCATATTCTTAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAACTTGGTCTCAGTCTATGATCCAAATGCTGCATCAGAAAAATTCTCTATGAAGGAGTTTGAAGAGCTGAAATTAGAGAAAGAGAAGGCTGCAATGGATCTGTCAAGATGTACAGAAAATCTTGAAATGACCAAGTCTCAATTACAAGAGACAGAGCAGCTTTTGGCGGAAGTCAAATCACAGTTGGCTTCTGCTCAAAGATCAAACAGCTTGGCTGAGACACAGCTGAAATGTATGGCTGAGTCATACAGGTCTCTTGAAACACGTGCACATGAGTTAGAAACTGAGCTGAATCTTCTGCGAGCTAAGACAGAAGCTCTAGAGAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGATGCTTTGGCCAACTGTAAGGAGCTAGAAGAGCTATTACAAAGGATTGAGAGTTCAGCAGCTGATAATGACCTCAAGACCAATCAGGAGAGAGATTTAGCAGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATCTTTCTTCTCGGTAAGCAGCTGAAGGCTCTGCATCCTCAAACAGAGCAAATTGGATCTCCGTACATTGAAAGAAGTCCAAAGGCTGAAGGCTTCACTGAGGATGAACCTACTACTAGTAACCCAAATTTGCAAGAATTGGATCAGACTGAGATGGAGAGTGCTACTTCTGCTTTTCTGCAGAGACAGGGTGCGGAGTCCCCCTTGCATTTTCCCAACAGCTTATGCAGTCCATCAGATAATGAGGCAAACGTTTCAGCCGGATCTCCAGTAAAGCCACCAAAACACAGGCCTACCAAGTCAGCCTCCTCATCAGCCTCCTCCACTCCTACACCAGAGAAACATGCACGAGGGTTTAGTAGATTCTTTTCGTCAAAAGGAAAGAACGGTCACTGA 3258 0.426 MDRRWPWKKKSSDKAVLEKAVAALDSAGASSQGNGNQDNYKKPNYVQISVESYSHLTGLEDQVKTYEEKVHTLEDEIKELRDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIVNLEQELLRSAAENGALSRSLQERSSMLMKISEEKAQAEADIELLKSNIESCEREINSLKYELHVVSKELEIRNEEKNMSIRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKSVSPHLSPLPEFSIENVQKFQKENEFLTERLLVMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAYNQQKGSPKSIVRMTHESIYSQNASNAPSVVSMSEDGNDDVGSCADSWATALISELSQFRKEKNTEKSSKPEATNKLELMDDFLEVEKLARLSNDSDGDASVSVSSNNKTSEIVTNDVSDVNTGKDDSSEKQIDTNPLPNQVFSGGVLSAPEPGSDVDDFSLTDLRSRILLVFESMSKDAHKGKILEDIKHILEDSRDTCVQHSVGCFPQDVQQLQPSDSPCDRQVHPEDAGLSLEKDATLSKQATECVQITSYLEAAISQIHDFVLILGREAMAVHDISSNGDGMSQKIEEFSVTFNKVLCNKASLSQFVLELSYVLAKVSEFRFNVLGYKGTEAETNSPDCIDKIALPENKLVQDNSTGERYQIGCSHILNPCSDPEVPDDGNLVSVYDPNAASEKFSMKEFEELKLEKEKAAMDLSRCTENLEMTKSQLQETEQLLAEVKSQLASAQRSNSLAETQLKCMAESYRSLETRAHELETELNLLRAKTEALENELQDEKRGHEDALANCKELEELLQRIESSAADNDLKTNQERDLAAAAEKLAECQETIFLLGKQLKALHPQTEQIGSPYIERSPKAEGFTEDEPTTSNPNLQELDQTEMESATSAFLQRQGAESPLHFPNSLCSPSDNEANVSAGSPVKPPKHRPTKSASSSASSTPTPEKHARGFSRFFSSKGKNGH 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 1017 1040 - -
Glsi10g0145 1085 Coils Coil 351 371 - -
Glsi10g0145 1085 Coils Coil 934 954 - -
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 499 544 - -
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 1017 1085 - -
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 1052 1068 - -
Glsi10g0145 1085 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Glsi10g0145 1085 Coils Coil 140 200 - -
Glsi10g0145 1085 Coils Coil 215 291 - -
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 971 999 - -
Glsi10g0145 1085 Coils Coil 56 97 - -
Glsi10g0145 1085 Pfam Filament-like plant protein, long coiled-coil 94 971 IPR008587 -
Glsi10g0145 1085 MobiDBLite consensus disorder prediction 501 527 - -
Glsi10g0145 1085 SUPERFAMILY Tropomyosin 808 970 - -
Glsi10g0145 1085 Coils Coil 809 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0145 Glsi-ChrGlsi10 1058366 1062621 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0145 10 1058366 1062621 Glsi08g2023 08 14232937 14237271 CCT
Glsi10g0145 10 1058366 1062621 Glsi10g0145 10 1058366 1062621 ECH