Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0143 ATGCATCCTGAGCCCAGACATGAGTCATGTGATGGGCCAGATAACAGCTCTGGGCTAATGAGGAAAAGGAGGGCAGGGCTCGCAATCGCGGGTCTTAAAGATGAGTTTGATGAACGTTTTTGTAATTTTGGTCGTTGTACAATGCCCTATCACCCACATATTTCCAGTGATACCACAAATATCTTCATTTCTTGTCGAAGTGGGTTGATGGTGATTACTTGGTTCCTCTCTCTTTTGAAGGCCAAACGTGTCCCCCTTGCAAAACGAACTGCTGGCTGGGATTCCATGTCCCCCGCGTGGCATTATGACCTTGCAGAGTCCAAGTTTGAAATACACGGATTGGCAGTTTACGACACAACCGGCACTCTATCAGCGGACTATATCTCGGATCTCCCCTGCGTGCGTCCAGAATTGCTGGATTATTTGGTAAGGTTGCCATTACTACTGCAGTTTTTAATTCCAATTCAAACTGTCTTTAATAATCTCGGCGGTCTAAAGATCCCCGAGGGATACATACCATCGAGAATGAATTTGGAAAGTGTGAACCGATTACACCAATTCTCATTCCCTTATTCTTGCCCACGACCAACTCCTTCTCTCGCCCCTTCATTACCTTCGTACTTTATACTGAACCCCCAACTCCCCCAATCAATTCAACCTTGCCTTTTTTGGTTTCTAAACCGCTTTCCTCTTATGGAAAAGGAAAATCAACACCAACCCACGAATTCCAGGTTCAGACGAATCTGTGTGTTCTGCGGGAGCAGTCCCGGAAAGAACCCCAGCTACCAGCTTGCTGCTATTCAACTCGGAAATCATTTGGTCGAAAGGAACATTGACTTGGTCTACGGAGGAGGAAGCATTGGGTTGATGGGTCTAATATCTCAAGCCGTCTATGACGGTGGTCGCCACGTATTAGGAGTGATTCCCGAGTCACTTATGCCAAGAGAGATAACCGGAGAGACAGTGGGAGAGGTACGAGCTGTGTCGGGGATGCACCAACGCAAAGCGGAAATGGCTCGACAAGCTGACGCATTTATAGCCTTGCCAGGTGGATATGGCACTCTTGAAGAACTACTGGAAGTTATCACCTGGGCTCAACTGGGAATCCATGATAAACCCGTAGGGTTGTTGAACGTGGATGGGTACTATAACTCCCTGCTCTCATTCATAGACAAAGCTGTGGAAGAAGATTTCATAACACCCGCCGCCCGTCACATTCTTGTGTCCGCCCAGACTGCCCAAGAGCTCATGTGCAAGCTCGAGGAATATGCGCCCAAGCACTGTGGTGTGGCCCCTGAGCTAAGTTGGGAAATGGAGCAACACTTGGTTCACACTGCAAAGTCAGACATATCACGTTGA 1359 0.4798 MHPEPRHESCDGPDNSSGLMRKRRAGLAIAGLKDEFDERFCNFGRCTMPYHPHISSDTTNIFISCRSGLMVITWFLSLLKAKRVPLAKRTAGWDSMSPAWHYDLAESKFEIHGLAVYDTTGTLSADYISDLPCVRPELLDYLVRLPLLLQFLIPIQTVFNNLGGLKIPEGYIPSRMNLESVNRLHQFSFPYSCPRPTPSLAPSLPSYFILNPQLPQSIQPCLFWFLNRFPLMEKENQHQPTNSRFRRICVFCGSSPGKNPSYQLAAIQLGNHLVERNIDLVYGGGSIGLMGLISQAVYDGGRHVLGVIPESLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEDFITPAARHILVSAQTAQELMCKLEEYAPKHCGVAPELSWEMEQHLVHTAKSDISR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0143 452 PANTHER LOG FAMILY PROTEIN YJL055W 239 443 - -
Glsi10g0143 452 NCBIfam Rossman fold protein, TIGR00730 family 247 423 IPR005269 GO:0009691|GO:0016787
Glsi10g0143 452 FunFam CASP-like protein 235 422 - -
Glsi10g0143 452 SUPERFAMILY MCP/YpsA-like 244 423 - -
Glsi10g0143 452 Gene3D - 234 422 - -
Glsi10g0143 452 Pfam Possible lysine decarboxylase 290 419 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0143 Glsi-ChrGlsi10 1049180 1052901 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0143 10 1049180 1052901 Glsi08g2027 08 14265942 14267372 CCT
Glsi10g0143 10 1049180 1052901 Glsi10g0143 10 1049180 1052901 ECH