Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0134 ATGATCCGATTCATACTCTTGCAGAACAGGCAGGGGAAGACCCGTCTAGCCAAATACTATGTTCCTCTCGAGGATTCCGAGAAGCATAAGGTTGAATACGAGGTTCATCGTCTGGTGGTAAACAGAGATCCCAAATTTACAAATTTCGTTGAGTTTCGTACATACAAGGTAATCTACAGGCGATATGCTGGATTGTTCTTCTCACTCTGTGTTGACATCACTGATAATGAGTTGGCATACTTGGAGTGCATTCATTTATTCGTGGAAATATTGGATCATTTCTTCAGCAATGTTTGTGAATTGGATTTGGTTTTTAACTTCCACAAGGTCTATCTTATACTTGATGAATTCATTCTAGCTGGCGAACTGCAAGAAACAAGCAAGAAGGCCATCATTGAGAGAATGGGGGAGCTGGAAAAACTTGAGTGA 429 0.4079 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTYKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKLE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0134 142 Gene3D - 1 142 - -
Glsi10g0134 142 FunFam AP complex subunit sigma 1 142 - -
Glsi10g0134 142 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
Glsi10g0134 142 CDD AP2_sigma 1 141 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Glsi10g0134 142 PIRSF AP_complex_sigma 1 142 IPR016635 GO:0015031
Glsi10g0134 142 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 140 IPR016635 GO:0015031
Glsi10g0134 142 SUPERFAMILY SNARE-like 1 136 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0134 Glsi-ChrGlsi10 990323 992023 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0134 10 990323 992023 Glsi10g0134 10 990323 992023 ECH