Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0124 ATGGATTATTTGGGATTTCCGAGAGGATGGGCAGAGTCACAGAAGTCTGCTGGGCCTGAGCATCGGCAATTTGAAGAGGAGGAGGAGAGTGACAATTTTCGCTGCAAAACAATATTCAGCAACCCTCCCTCCATACACTCATCCTTGTCCCATCAATCCGCATATATCTTAGAGCTAAGAAGAATTTGGATAACTGGTTTTCCCAGCTCCTTCTTCTTCTTCTTCGTTCTTTATTTCTCTCTACCATCCCTCTCTTTTCTGTTCGTAAGCTTCCAAATGGATCAGCTAACACTATTATTTTCATTTCTATTAACACTTCTTTTGTCAGTATCAGGAGTAATTTCAACTACATTCACAATAGTTAACAAATGCGAGTACACGGTATGGCCAGGCATTCTTTCCAATGCTGGAGTTGCGCCTCTTCCAACCACCGGCTTCGTTCTGCAAACAGACGAGTCTAAGACGATCTCCGCACCCACCTCTTGGGGAGGTCGCTTCTGGGGTCGAACTCTCTGCAACCAAGAATCCACCGGCAAGTTCTCCTGCGTCACAGGTGACTGCGGCTCGGGGAAGCTAGAATGCGCCGGCAATGGAGCCGCACCGCCAGCCACGTTGGCAGAATTCACTTTAGACGGAGACGGTGGGCTTGATTTCTTCGATGTGAGCTTGGTAGACGGCTACAACGTCCCTATGCTGGTGGTTCCTCAAGGGGGTTCGGGTCAGAACTGCACGAGCACGGGGTGCGTTGTGGATCTGAACGGCGCGTGTCCTTCAGAGCTGAGGGTTGCGAGCGTGGATGGTAAAAAAGGAGTGGCTTGCAAGAGCGCTTGCGAGGCATTTGGGTCGCCTCAGTACTGTTGCAGCGGTGCGTATGGCACACCAGATACTTGCAAGCCGTCCTCTTACTCGGAGATATTCAAGAGTGCTTGCCCACGCGCCTACAGCTATGCGTATGATGATAAGACGAGCACATTTACGTGTGCGGCTGCAGATTATACCATCACCTTTTGTCCTACGCCTAACACCAGCCAGAAAGCGTCCCAGGGGCAAAACCCGAAATCGGACGGCACCCCTCCCTCTCCCGACTCATCGCCGGTGGATAGCACAATTGTGTACGAAGGTGCTTTTGATCAGAGCGACATATCATGGACCACGTGTACTCACGTGTTGCAATCCCGAGCTATTGCCGGCATAGTCAGCATCGCTATCACCATTTGGCTGTCGTGCCACCTCTTCTAA 1239 0.5101 MDYLGFPRGWAESQKSAGPEHRQFEEEEESDNFRCKTIFSNPPSIHSSLSHQSAYILELRRIWITGFPSSFFFFFVLYFSLPSLSFLFVSFQMDQLTLLFSFLLTLLLSVSGVISTTFTIVNKCEYTVWPGILSNAGVAPLPTTGFVLQTDESKTISAPTSWGGRFWGRTLCNQESTGKFSCVTGDCGSGKLECAGNGAAPPATLAEFTLDGDGGLDFFDVSLVDGYNVPMLVVPQGGSGQNCTSTGCVVDLNGACPSELRVASVDGKKGVACKSACEAFGSPQYCCSGAYGTPDTCKPSSYSEIFKSACPRAYSYAYDDKTSTFTCAAADYTITFCPTPNTSQKASQGQNPKSDGTPPSPDSSPVDSTIVYEGAFDQSDISWTTCTHVLQSRAIAGIVSIAITIWLSCHLF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0124 412 MobiDBLite consensus disorder prediction 1 29 - -
Glsi10g0124 412 MobiDBLite consensus disorder prediction 341 368 - -
Glsi10g0124 412 CDD TLP-PA 117 337 - -
Glsi10g0124 412 Gene3D Thaumatin 116 338 IPR037176 -
Glsi10g0124 412 SUPERFAMILY Osmotin, thaumatin-like protein 116 338 IPR037176 -
Glsi10g0124 412 MobiDBLite consensus disorder prediction 341 367 - -
Glsi10g0124 412 ProSitePatterns Thaumatin family signature. 178 194 IPR017949 -
Glsi10g0124 412 PANTHER OS03G0233200 PROTEIN 102 338 IPR001938 -
Glsi10g0124 412 PRINTS Pathogenesis-related protein signature 117 129 IPR001938 -
Glsi10g0124 412 PRINTS Pathogenesis-related protein signature 217 233 IPR001938 -
Glsi10g0124 412 PRINTS Pathogenesis-related protein signature 165 176 IPR001938 -
Glsi10g0124 412 PRINTS Pathogenesis-related protein signature 328 337 IPR001938 -
Glsi10g0124 412 SMART tha2 118 338 IPR001938 -
Glsi10g0124 412 FunFam THAUMATIN-LIKE PROTEIN 1 116 338 - -
Glsi10g0124 412 Pfam Thaumatin family 122 338 IPR001938 -
Glsi10g0124 412 ProSiteProfiles Thaumatin family profile. 115 338 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0124 Glsi-ChrGlsi10 934789 941001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0124 92 357 Receptor kinase-like Gene Family AT5G38280 52.416 1.06e-92 291