Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0108 ATGGCTCAGACTACGCCCAATCACACACAGACTGTTTCTGGATGGGCAGCTCATGATTCTTCTGGCAAAATTACCCCTTTCAACTTTAAACGAAGGGAGAACGGCGTGAACGATGTCACCATAAAGATATTGTATTGTGGGATTTGCCACACAGACCTTCACCACGTTAAAAATGAGTGGGGCAACACTATGTATCCTGTAGTTCCCGGGCACGAGATCATAGGGGTGATAACCAAGGTGGGGAGCAATGTGAAGGGATTCAAGGAAGGAGAGAGGGCGGGGGTGGGGTGTTTGGCAGCGACGTGCTTGGATTGTGAATGCTGCAAGAATGATATGGAGAACTACTGCCAACGCGTACAGTTTACGTACAATGGTATTTTCTGGGATGGCAGCATCACCTACGGTGGCTACTCCGACATCTTGGTCGCCGATTACAGATATGTGGTGCACATTCCGGAAAACCTGGCAATGGATGCAGCGGCACCGCTACTGTGTGCGGGAATAACAGTGTTCAGTCCGCTGAAAGAGCACAATTTGGTGGAGTCAGGGGGGAAAAGGATCGGAGTGGTGGGGTTGGGAGGGCTTGGACATGTGGCCGTGAAATTTGGCAAGGCATTCGGCCACCACGTCACTGTCATCAGCACCTCCCCCTCCAAAGAAACCGAGGCTAAGCTCCGACTCGGAGCCGATGATTTCATTGTCAGCACCAACCCCATGGAAATGCAAGCTCGCAGGAGGACCCTTGATTTCATTTTGGACACCGTATCAGGGGAGCACTCCCTGTTGCCCATCTTGGAATTGCTCAAAGTCAACGGCACATTGTTCATCGTGGGAGCACCAGACAAGCCCTTCCAATTGCCAGCTTTCCCATTGATATTTGGCAAAAGGGCAGTGAAAGGTGGGATGATAGGAGGAATAAAAGAGACGCAGGAAATGTTGGAGTTTTGTGGGAAGCACAATATCACGTGCGACATTGAGTTAATCACTCCAGATAGAATCAACGAGGCTATGGAGCGACTTGCTAAGAACGATGTCCGCTACCGTTTTGTCATTGACATTGCCGGAAGCTCATCAAGCCTTTAA 1083 0.5014 MAQTTPNHTQTVSGWAAHDSSGKITPFNFKRRENGVNDVTIKILYCGICHTDLHHVKNEWGNTMYPVVPGHEIIGVITKVGSNVKGFKEGERAGVGCLAATCLDCECCKNDMENYCQRVQFTYNGIFWDGSITYGGYSDILVADYRYVVHIPENLAMDAAAPLLCAGITVFSPLKEHNLVESGGKRIGVVGLGGLGHVAVKFGKAFGHHVTVISTSPSKETEAKLRLGADDFIVSTNPMEMQARRRTLDFILDTVSGEHSLLPILELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRAVKGGMIGGIKETQEMLEFCGKHNITCDIELITPDRINEAMERLAKNDVRYRFVIDIAGSSSSL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0108 360 Gene3D - 166 323 - -
Glsi10g0108 360 Gene3D - 15 353 - -
Glsi10g0108 360 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Glsi10g0108 360 CDD CAD1 14 352 IPR047109 GO:0016616
Glsi10g0108 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Glsi10g0108 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Glsi10g0108 360 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Glsi10g0108 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Glsi10g0108 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Glsi10g0108 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Glsi10g0108 360 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Glsi10g0108 360 SUPERFAMILY GroES-like 17 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0108 Glsi-ChrGlsi10 800504 802109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0108 14 356 Monolignol Biosynthesis Gene Families AT2G21730 60.465 4.23e-151 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0108 10 800504 802109 Glsi10g0108 10 800504 802109 ECH