Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0107 ATGGCTGTAATTGTGACAGTGATGCTCATAATTTTTTCGGTGACTTGTCTAGCGAGTGCACTAAGCGTAAACTACTATGATCGAAAGTGCCCTCAGGTGGAGTACATAGTGGCTGGTGCTGTACATAAAGCAATGATGAATGATAAAACCGTTCCAGCTGCCTTGCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGCGATGCCTCTGTTCTACTGGAATCAAAGGGAAAGAATAAAGCAGAAAAAGATGGGCCTGCCAATATTTCTTTGCATGCATTCTATGTCATAGAGAATGCTAAGAAAGCAGTGGAAGCCGTATGTCCCGGAGTGGTATCTTGTGCTGATATTTTAGCACTTGCTGCTAGGGACGCCGTTACCCTGTCCGGAGGTCCCACATGGGAAGTGGCGAAAGGAAGAAAAGATGGAAGAACATCAGAGGCCATTGAAACCAGACAATTGCCAGCTCCCATCTTCAACATCTCCCAACTACAGCAAAGCTTCTCTCAGAGAGGGCTTTCCTTGGAAGATCTGGTAGCACTCTCAGGAGGTCACACCCTTGGGTTCGCTCATTGTTCGTCCTTCCAGAACAGAATCCACAACTTCAACGCCAATCAAGACATTGACCCCTCCATGAACCCCTCATTCGCAGCCAGGCTTCGAAGCATTTGTCCCTCTCGCAACACCCTGAAAAATGCAGGTGCTCCATTGGATTCTAGCTCCACAACGTTTGACAATGGGTACTACAAGCTACTCCTCCAAGGAAAGAGCATATTTTCTTCTGATCAAGCTCTGCTTGCTCATCCCAAGACCAAGGAATTGGTTTCCAAGTTCGCAAATTCCCAAAAGGAGTTTGAAAGGGCCTTTGTCAAGTCCATGATCAAGATGAGCAGCATCCCCGGCGGACAAGAAATCAGGCTCCGCTGTAAAGTGGTTAGATGA 945 0.4688 MAVIVTVMLIIFSVTCLASALSVNYYDRKCPQVEYIVAGAVHKAMMNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNKAEKDGPANISLHAFYVIENAKKAVEAVCPGVVSCADILALAARDAVTLSGGPTWEVAKGRKDGRTSEAIETRQLPAPIFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHNFNANQDIDPSMNPSFAARLRSICPSRNTLKNAGAPLDSSSTTFDNGYYKLLLQGKSIFSSDQALLAHPKTKELVSKFANSQKEFERAFVKSMIKMSSIPGGQEIRLRCKVVR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0107 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Glsi10g0107 314 ProSiteProfiles Plant heme peroxidase family profile. 20 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 FunFam Peroxidase 24 168 - -
Glsi10g0107 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601|GO:0042744
Glsi10g0107 314 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 FunFam Peroxidase 156 297 - -
Glsi10g0107 314 Gene3D Peroxidase, domain 2 156 297 - -
Glsi10g0107 314 Gene3D - 24 313 - -
Glsi10g0107 314 PANTHER PEROXIDASE 25-RELATED 12 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 SUPERFAMILY Heme-dependent peroxidases 21 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi10g0107 314 Pfam Peroxidase 39 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0107 Glsi-ChrGlsi10 798537 799638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0107 7 314 Peroxidase AT5G42180 72.492 6.07e-175 485