Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0099 ATGGGACTCGGTTTCTTCAAGGCGCTTTGCTGTAGTAGCTCACATGAAATTCCGATCGCGTCCTCAGATTCCTCTCCTCGGCGCACCAAACACAGGTCCGGGGAAACCCAATATGGGTTCAACCCAACTCCCCTTCCTCCTCGTCCTCCAATGTCTACCCAGTCTTCACAAATAGGACCTGTGCTAGGCAAACCGTACGTTAACATAAATTTGATTTACGATATGGACAAAGAATTGGGCAGAGGGCAGTCCGGGGTGACTTATCTCTGTACGGAGAAGGGGTCAGGGCGAAAGTATGCGTGCAAGTCCATAGCAAGGAGGAAGCTGTTGAGGAAAGAAGAAATAGAGGACGTTCGAAGAGAGATTTTGATACTGCAGCATCTTTCAGGGCAACCCAATATTGTGGAATTCAGGGGCGCTTATGAGGACAGGCAAAACGTGCACTTGGTGATGGAGCTGTGCACTGGCGGGGAGCTATTCGACCGGATTATTGAGAAAGGGAATTACACGGAGCGTGAAGCCGCTGTGTTATTCAGGCAGATTGTGAATGTAGTTCATGTGTGCCATTTTATGGGTGTGATGCATAGGGACCTTAAGCCGGAGAATTTCTTATTGTCCAGTAAGGATAAGAATGCCCCCATCAAAGCTACCGATTTTGGACTCTCCGTCTTCATTGAGCAGGGTTAG 687 0.4876 MGLGFFKALCCSSSHEIPIASSDSSPRRTKHRSGETQYGFNPTPLPPRPPMSTQSSQIGPVLGKPYVNINLIYDMDKELGRGQSGVTYLCTEKGSGRKYACKSIARRKLLRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVHLVMELCTGGELFDRIIEKGNYTEREAAVLFRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDKNAPIKATDFGLSVFIEQG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0099 228 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 224 - -
Glsi10g0099 228 Gene3D Transferase(Phosphotransferase) domain 1 159 228 - -
Glsi10g0099 228 MobiDBLite consensus disorder prediction 18 59 - -
Glsi10g0099 228 ProSiteProfiles Protein kinase domain profile. 73 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0099 228 SUPERFAMILY Protein kinase-like (PK-like) 73 226 IPR011009 -
Glsi10g0099 228 Pfam Protein kinase domain 73 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0099 228 SMART serkin_6 73 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0099 228 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Glsi10g0099 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Glsi10g0099 228 FunFam Calcium-dependent protein kinase 1 75 158 - -
Glsi10g0099 228 Gene3D Phosphorylase Kinase; domain 1 75 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0099 Glsi-ChrGlsi10 738509 739195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0099 27 228 EF-hand Containing Proteins AT1G50700 64.532 1.43e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Glsi10g0099 Pkinase 1e-41 CL0016