Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0089 ATGCCAGCAGTAAACTTAGCATTTTCAGGCAGCAGGCATGGTGTATGCTATGGTTCAGTGGATTTTCATTATTTTGTCATGCTTGGATCCTTTACTCTCTCATATTTCACGCTGTGTTTAATATGCAAATTTTCCTTTCCTGCACATGGCAACAACGGGAAGATAACTGCATTTATAGGTGGTCTTGACCTTTGCGATGACCGACAATTATTTGAAATCGCTCATGCGGACTTACCAAGTGAAATTTCTATTCTCTTAAATTTCAATGATGGTCAGGAACCAAAGGTCCAAGGGAGCCATGGCATGATTTACATTGCAAAATCGAGAGAGTTAGAATGGATCTCTTGGATTCTTAATCCTTCTGCATCAACTCCAAATGATGATCAAGAATTATGGGTATCAAAAGAAGATGATCCTGAAAACTGGCATGTTCAGGTATTTCGATCCATTGATTCAGGTTCTTTGAAAGGATTTCCTAAGGATGTCCATGAAGCAGAGGCTCAGATCAACAGCAAGATTAGAGCCAAGGAGAGATTTGCAGTTTATGTTGTAATGCCAATGTGGCCTGAAGGTGTCCCTTCATCCGCCTCAGTGCAGGAAATCCTTTTTTGGCAGGGACAAACTATGCAAATGACGCATCAAGTCATAGCAAATGAGTTAAAATCCATGAACCTAGACAACGGCCATCCTCAAGATTATCTCAATTTCTACTGTAGAGAGAAGTTACCAAATGAAGTTTCAAGTTCAAGTAATTCACCTCTGAATAATGGCAACATGGTTTCAGCGTCACAAAAGTTCCAAAGGTTTATGATTTATGTACATGTACATGCCAAGGGAATGATTGTGGATGATGAGTACGTGATAATAGGGTCTGCCAATATCAATCAACGATCATTGGCTGGCTCAAGAGATGGTGAGATAGCAATGGGTGCTTATCAACCCCATCGTACATGGGGAAAGAAAAGGGAACAACCATAG 978 0.4049 MPAVNLAFSGSRHGVCYGSVDFHYFVMLGSFTLSYFTLCLICKFSFPAHGNNGKITAFIGGLDLCDDRQLFEIAHADLPSEISILLNFNDGQEPKVQGSHGMIYIAKSRELEWISWILNPSASTPNDDQELWVSKEDDPENWHVQVFRSIDSGSLKGFPKDVHEAEAQINSKIRAKERFAVYVVMPMWPEGVPSSASVQEILFWQGQTMQMTHQVIANELKSMNLDNGHPQDYLNFYCREKLPNEVSSSSNSPLNNGNMVSASQKFQRFMIYVHVHAKGMIVDDEYVIIGSANINQRSLAGSRDGEIAMGAYQPHRTWGKKREQP 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0089 325 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 276 298 IPR001736 GO:0003824
Glsi10g0089 325 Pfam PLD-like domain 270 307 IPR025202 -
Glsi10g0089 325 PANTHER PHOSPHOLIPASE D 110 168 IPR015679 -
Glsi10g0089 325 SMART pld_4 271 298 IPR001736 GO:0003824
Glsi10g0089 325 Gene3D Endonuclease Chain A 143 314 - -
Glsi10g0089 325 SUPERFAMILY Phospholipase D/nuclease 174 304 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi10g0089 Glsi-ChrGlsi10 695300 698499 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0089 164 325 Phospholipase D Gene Family (Wang group) AT4G00240 54.217 4.59e-52 181