Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0067 ATGGCTGTGATCGCTCCCACCAAGGATACCCCTGCTATGGAATTTAGGTTGGGGAAGCTGAGCAAGCATAATGGCTATGACTGTAAATACCAAATACCACTCTACAGTTACTGCCCAGCATATGGTCAAGAAATAGGATGCATAATCCCTTCAAAGATCAGTTTAGTGATTGATTTGACAAATACTACTCATTACTACCCACTATCAGATTGGACAGGAGAAGGGATTGGTCATGTCAAGATAAGATGCAAAGGAAGAGATTTTGTACCTGACAATGAATCTGTAAACAAATTTTACAATGAGAAGACTGAAGAAGTTGTTTGTCCTCAAACTCCAGAATGGAACAGACTTTCTGATCCTAATTTTCATGATGCTGTTGTCCCAACTGTAGAAAATTGTGGAGATGTTCCTCAGCATGTATGTGATTTATTCCTTATTGAGGGACATGCTTTTGTTTAG 459 0.3922 MAVIAPTKDTPAMEFRLGKLSKHNGYDCKYQIPLYSYCPAYGQEIGCIIPSKISLVIDLTNTTHYYPLSDWTGEGIGHVKIRCKGRDFVPDNESVNKFYNEKTEEVVCPQTPEWNRLSDPNFHDAVVPTVENCGDVPQHVCDLFLIEGHAFV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0067 152 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 101 IPR029021 -
Glsi10g0067 152 Gene3D Protein tyrosine phosphatase superfamily 35 107 IPR029021 -
Glsi10g0067 152 PANTHER MRNA-CAPPING ENZYME 37 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0067 Glsi-ChrGlsi10 573199 577791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0067 38 107 Protein tyrosine phosphatase (PTP) family AT5G01290 45.098 6.20e-19 80.5