Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0053 ATGGTTGAAAAGAAGGAGTTTCTCACGGTGGCGCCATTTGAGTGCGCATGGCGAAAGGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGCGTGGTTTTCGAAGCTTTCGCGCGCAATGATATAACGCTGGTTTTCCGGGAGAATGTGGGAAGCCGGCATTACCATTATAAAAGAGATAGTAGTCCCCATTATACCGTCATTTTGGGGAGTCATAGGAATAGACGGCTGAGAATTGAGGTCGATGGAAAAACTGTTGTTGATGTGGCAGGTGTTGGACTTTGTTGCTCTTCATCATTTCAGAGTTATTGGATCGGTATCTACGATGGGTTGATTAGCATCGGTAAAGGAAAATACCCTTTCCAGAATATTGTCTTCCAGTGGCTGGATTCTGATCCAAATTACAACGTTCAGTATATTGGGCTCTGTAGCTGGGATAAACATGTTGGATATAGAAATGTTAACGTGTTGTCATTAACACACAAACATATGTCCCTGTGGAAACATGTGAGTTTTGGGGAATATGAGGTCGAGGAGGATTGTGACGAGGAGTTAGGAGACAAACCGGTGGATTATGATAATTGGGGGCTGAAAAACTTTCTGGAGAGCTGGGAATTGTCTGACGTGTTATTCATTGTTGGTGTAGAGGAAAGACCAGTACCTGCTCACAAGGCAATTTTAGCAGCATGTGGGAATTTTCCTATAACCTCATCATTCTTTGTTATCTCGCTGCCCACAGTAACTTATCCGGTTCTCCATGCACTACTTCAGTACATATACACTGGCTGGACTAAGATTGCTCAGGAACAACTTGGTAAGTTGAGGGCTTTAAGTTTACAGTTTGAACTGATGTCACTGGTGAAGCAATGTGAAGAGACTATGGAACGGATTAAGCTAAATAAGGTGTTGTTTGACTCGGGCAAGAATATAGAGTTATCATTTCCAAGCACCACACCTCATTGTTGTACGACATTATCCTCACTTCCTGTCAGCAGTCAGAGACTGAAACAATTGCAATTAACTGGTCATTACAGTGATGTAGACATATATATTGAGGGTTATGGGTTTATTGCCCAAGCACATAAAATTGTTCTCAGTTTATGGAGCATTCCATTTGCTAAGATGTTCACAAATGGAATGAGTGAAAGCTTGTCTTCCAAGATTACTCTTAGGGATGTGCCACCAGAAGCTTTCAAGTCTTTGCTCGAGTATTTATACAGTGGGGAACTAAATGATGAAGTTAATACAGACCCTGTTGCCTTGTTGCTCGATCTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAAGAATGCTGCAAAATGCTTTTAGAATGCCTCTCAGAGGATTCAGTATGTCCACTCCTCCAAGTGGTTTCTTCGATCCCATCATGTAGACTTATTAAAGAAACATGCCAGAGGAAATTTTCCATGAACTTTGACTATTGTACTAGTGCGAGTGCTGACTTTGTCTTGTTAGATGACACAAACTTCAGCAGTATAATTCAGCATCCAGATTTGACAGTTACATCTGAAGAGAAAGTTCTCAATGCAATCCTGATGTTTGGCATGAAAACAGAAGAATTAGTTGCATGGGAAGTGGTAGATGAGTTGATGATAAATTCAAAACCTGAACTCCTTTTTGGTGAGAGGCTTCAGTTAGTTCATGACTTGTTGCCATTTGTGAGATTTCCGCTACTTCCATACTCCTTGCTTAAAAAGTTGCAGAATAGCAGCATTAGCTGGCATATTCCTGTTTTTCAAAATCTTGTTAATGAGGCCCTTAATTATGTTGAATATGGACTGGCAAGGCCAGAAAATGAAGAGAATGTTAGATTTCAACATAGGCGGTCTAGCTACAAGGAGCTCCAGTACATCTGTGATGGGGACAGCAACGGGGTTTTGCACTTTGCAGGCACATCATATGGAGAACACCAGTGGGTTAATCCTGTTTTGGCAAAGACAATTACCATCATGGCTAGCAGTCCCCAGTCAAGATACACTGATCCCAAGGTTCTGGTTTCACGAACCTACCAGGGAACATCTTTTGCGGGGCCTCGACTGGAAAACGGACATAGTTGTGCCTGGTGGATGGTTGACCTTGGCCAAAATCATCAGCTTATGTGCAGCTACTATACCTTGAGACAGGACGGTTCCAGGGCTTTCATGAGATATTGGAATTTTCAGGGTTCACTCGATGGTAAGAGCTGGACGAATTTGAGAGTACATGAAAATGATTCGACTGTGTGCAAGCCTGGTCAATTTGCATCTTGGCCCATTACTGGCCCGAATGCTCTGCTTCCCTTTAAGTTTTTCCGGGTTGTTCTCACGGCACCCACGACGGATGCCACAAATCCCTGGAACTTGTCCATTTGTTACTTGGAACTATATGGCCACTTCCTTTAG 2409 0.4271 MVEKKEFLTVAPFECAWRKDLKFREAGRGCVVFEAFARNDITLVFRENVGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGVGLCCSSSFQSYWIGIYDGLISIGKGKYPFQNIVFQWLDSDPNYNVQYIGLCSWDKHVGYRNVNVLSLTHKHMSLWKHVSFGEYEVEEDCDEELGDKPVDYDNWGLKNFLESWELSDVLFIVGVEERPVPAHKAILAACGNFPITSSFFVISLPTVTYPVLHALLQYIYTGWTKIAQEQLGKLRALSLQFELMSLVKQCEETMERIKLNKVLFDSGKNIELSFPSTTPHCCTTLSSLPVSSQRLKQLQLTGHYSDVDIYIEGYGFIAQAHKIVLSLWSIPFAKMFTNGMSESLSSKITLRDVPPEAFKSLLEYLYSGELNDEVNTDPVALLLDLLLLADQFGVTLLHQECCKMLLECLSEDSVCPLLQVVSSIPSCRLIKETCQRKFSMNFDYCTSASADFVLLDDTNFSSIIQHPDLTVTSEEKVLNAILMFGMKTEELVAWEVVDELMINSKPELLFGERLQLVHDLLPFVRFPLLPYSLLKKLQNSSISWHIPVFQNLVNEALNYVEYGLARPENEENVRFQHRRSSYKELQYICDGDSNGVLHFAGTSYGEHQWVNPVLAKTITIMASSPQSRYTDPKVLVSRTYQGTSFAGPRLENGHSCAWWMVDLGQNHQLMCSYYTLRQDGSRAFMRYWNFQGSLDGKSWTNLRVHENDSTVCKPGQFASWPITGPNALLPFKFFRVVLTAPTTDATNPWNLSICYLELYGHFL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0053 802 ProSiteProfiles BTB domain profile. 206 267 IPR000210 GO:0005515
Glsi10g0053 802 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Glsi10g0053 802 Pfam Farnesoic acid 0-methyl transferase 52 148 IPR022041 -
Glsi10g0053 802 Gene3D - 478 599 - -
Glsi10g0053 802 CDD BTB_POZ_ZBTB_KLHL-like 205 280 - -
Glsi10g0053 802 Gene3D Potassium Channel Kv1.1; Chain A 325 477 IPR011333 -
Glsi10g0053 802 Pfam BTB/POZ domain 196 294 IPR000210 GO:0005515
Glsi10g0053 802 Pfam BTB/POZ domain 334 446 IPR000210 GO:0005515
Glsi10g0053 802 SUPERFAMILY POZ domain 195 294 IPR011333 -
Glsi10g0053 802 SMART BACK_2 454 577 IPR011705 -
Glsi10g0053 802 Pfam F5/8 type C domain 659 749 IPR000421 -
Glsi10g0053 802 SUPERFAMILY Galactose-binding domain-like 645 801 IPR008979 -
Glsi10g0053 802 SUPERFAMILY POZ domain 331 445 IPR011333 -
Glsi10g0053 802 Pfam BTB And C-terminal Kelch 460 524 IPR011705 -
Glsi10g0053 802 CDD BTB_POZ_ZBTB_KLHL-like 343 415 - -
Glsi10g0053 802 SMART BTB_4 206 297 IPR000210 GO:0005515
Glsi10g0053 802 SMART BTB_4 344 448 IPR000210 GO:0005515
Glsi10g0053 802 Gene3D - 618 801 - -
Glsi10g0053 802 PANTHER OS05G0345500 PROTEIN 3 801 - -
Glsi10g0053 802 Gene3D Potassium Channel Kv1.1; Chain A 194 305 IPR011333 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0053 10 456556 467324 Glsi10g0053 10 456556 467324 ECH