Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0051 ATGGGAGATGGTGTTTTGCCACCCGTTACCATGTTGCAACCACCGCTTGACTCCCCCGTGAATTTCGACTATTTGGATGATCACTTCTTGGATGGTTGCTGGTGGGAAACCGCTACAGATGGATCTGATTTCCTCCTCAATAGTCCCTCTAGATCGAATCCTCTTTTTGACTCTTCGTTTTCATGGCCTACCTTGGGCGTAAGCGCATCTCACAGTACCGAACCGAATAGGAAGGACATAATTAATGTCTCGGGTAGTTGTAGTCAGTCTGAAATTCATTCATTTGAAGCATGTCAAGTGGTAAGAAGGTGCTGGATTGGACCCTCGGCTAATCCATCTTCTGTAATGGAGAGACTAATTAGGGCGCTTATGCATATCAGAGATTCAATTAAACACAAAGATGCGCTTATACAAATATGGGTGCCAGTTAATAGAGGGGGTAGGCGGATTCTAACAACTAATGATCTCCCGTTCTCACTTGAAAGTAGCTGTCCAAATCTTGCAAAGTACCGAGAAATCTCTTTGAAGTATCAGTTTTCAGCTGAGGAGGACTCTAAGGGGTTGGCACCAGGATTACCTGGTCGAGTTTTTCTGGAAAAGGTTCCTGAGTGGACTCCTGATGTTCGTTTTTTTACAAGTGGTGAGTACCCACGAATTGACCATGCTCAAAAGTATCATGTTCGTGGAACTTTAGCCCTTCCGGTCTTTGAGAAAGGTAGCAGGACTTGCTTGGGTGTTATTGAACTTGTGACCACTAACCAGCTGATCAAGTATCGTCCTCAACTCGAAACTGTTTGCAAAGCACTAGAGGCTGTTGATCTTAGGAGCTCCAAACTTTCAAGTATGCAAAATGTGAAGCTCGCATGCAGCAAGTCCTATGAAACTGCATTCCCCGAGATTCAAGAGGTGTTGAGATCCGCATGTGAAATGCACAAACTTCCTTTAGCTCAAACTTGGGTTCCATGCATCCAACAAGCCAAAGAGGGGTGCCGGCACTCAGATGATAATTATCTCCATTGTATATCTCCTGTGGGGCATGCTTGCTATATTGGTGATGACCGTGTCCGGAGTTTTCATGAGGCTTGCTCCGAGCATCACTTGTTAAAAGAGTATCCGCTGTCTCACCATGCAAGGATGTTTAGATTGAGGGCTGCTGTTGCTATCCGCCTGCGGAGCATCCATGGCAGTAAAGATGACCTTGTCCTAGAGTTCTTCTTGCCCGTGAATTGCACTGACAGGAATGAACAGAAGAAGATGCTTACTTCATTGTCCATGATTATTCAAAGGGTTTGCCATAGCTTACGGGTCATAACAGATGAAGAATTGGAGGAGGATACTGATTTATTAATTGATGAAGAGATAGTCCCTGCAGATATATCTGCTAGGACTTCTCGTTGGATGGAGATCCAACAGAGTGGGATGGTTGCCGTATTGGGCACTGAAGAAAAATCAAGCGAAAACCTAATGCAGCAACAAAAAGGCTCTATTTTGAAAGGTACCCTCCACTGTGTCGGGGAGACTATCATATCAGGTGTGGCTACAAGTAAAACGGGAGAGAAAAGACGAGTCAAAGCAGATAAAACTATCACATTGCAAGTTCTTCGGCAATATTTTGCTGGAAGCCTAAAAGATGCCGCAAAGAATATTGGCGACTCAGTTCAAGGTGTCTCTGGTGCTTTTCATGTAGATTCCTTCTACTCAAACTTCCCGAAATTAGCTTCTCAAAATTTTCCGGGAACCAGCCTTTTGTCAACTTGTAAGCAAAGTGATAATCAAAACCCATCAAGCACACAGCCTGAAGGTGCCGCGTCAAAATCACCCTCTTCCTCGAGCAGTCAGAGTTTCATTTCAAGCCATTCTTGTTTCTACATATCAGAGCAACAGCCTCTCACAAGAAATGTTGCCAGGAGCAAGGATCCTATAGCTGGAGAAGATCCTGCTGATGGTATGTTGAAGAGGGTCAGAAGGGAAGCAGAGCTAAAGTGCTTGAGTCAATATAAAGCAAGGCTCTTGCCAAGATCTCAAAGCCAGGAAATACTTGGGCACGACCCAAAAACTGAGTTGAAAAGCGGTCTCAAAGCACCTCAAAAGGAGAATGCTCAGAGAGTAAAAATCACATACGGAGATGAGAAAGCTCGATTCCGGATGCCAAAGAATTGGGGGTATGAAGATCTTTTGCAGGAAATAGCTAGACGATTTAACATAAATGACATTAGCAAATTCGATATCAAGTATTTGGATGATGACTCTGAATGGGTGTTACTAACTTGCGATGCTGATTTGGAGGAGTGTATTGATGTTGGTCAATCTTCTGAGAACAAAATATTGATAAGCTTGCCACATCAATTGCTCCTTCTCGTCATATGGTTACTCCGGTCAAAGCTAGTGTTTTTGGCTGGAAAAAAACTTAGATCAGTTAAAGAAGCTTTCTCATATCTAAATTGGCAGGTTGCTATGATTGAAGAGTCCAAGAGGGTTAGAAAACGGTTAGAGTTTTACTCATACCCTAAAAATAAAAAAGATAATAATAATAAAGGAAAGATAATGAGATTGTACTGA 2559 0.4306 MGDGVLPPVTMLQPPLDSPVNFDYLDDHFLDGCWWETATDGSDFLLNSPSRSNPLFDSSFSWPTLGVSASHSTEPNRKDIINVSGSCSQSEIHSFEACQVVRRCWIGPSANPSSVMERLIRALMHIRDSIKHKDALIQIWVPVNRGGRRILTTNDLPFSLESSCPNLAKYREISLKYQFSAEEDSKGLAPGLPGRVFLEKVPEWTPDVRFFTSGEYPRIDHAQKYHVRGTLALPVFEKGSRTCLGVIELVTTNQLIKYRPQLETVCKALEAVDLRSSKLSSMQNVKLACSKSYETAFPEIQEVLRSACEMHKLPLAQTWVPCIQQAKEGCRHSDDNYLHCISPVGHACYIGDDRVRSFHEACSEHHLLKEYPLSHHARMFRLRAAVAIRLRSIHGSKDDLVLEFFLPVNCTDRNEQKKMLTSLSMIIQRVCHSLRVITDEELEEDTDLLIDEEIVPADISARTSRWMEIQQSGMVAVLGTEEKSSENLMQQQKGSILKGTLHCVGETIISGVATSKTGEKRRVKADKTITLQVLRQYFAGSLKDAAKNIGDSVQGVSGAFHVDSFYSNFPKLASQNFPGTSLLSTCKQSDNQNPSSTQPEGAASKSPSSSSSQSFISSHSCFYISEQQPLTRNVARSKDPIAGEDPADGMLKRVRREAELKCLSQYKARLLPRSQSQEILGHDPKTELKSGLKAPQKENAQRVKITYGDEKARFRMPKNWGYEDLLQEIARRFNINDISKFDIKYLDDDSEWVLLTCDADLEECIDVGQSSENKILISLPHQLLLLVIWLLRSKLVFLAGKKLRSVKEAFSYLNWQVAMIEESKRVRKRLEFYSYPKNKKDNNNKGKIMRLY 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0051 852 CDD PB1_NLP 702 782 IPR034891 -
Glsi10g0051 852 Gene3D - 696 780 - -
Glsi10g0051 852 SUPERFAMILY CAD & PB1 domains 695 778 - -
Glsi10g0051 852 ProSiteProfiles PB1 domain profile. 700 783 IPR000270 GO:0005515
Glsi10g0051 852 SMART PB1_new 700 780 IPR000270 GO:0005515
Glsi10g0051 852 PANTHER PROTEIN NLP8 70 550 IPR045012 GO:0003700
Glsi10g0051 852 Pfam PB1 domain 702 771 IPR000270 GO:0005515
Glsi10g0051 852 MobiDBLite consensus disorder prediction 583 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0051 Glsi-ChrGlsi10 435389 440310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0051 20 771 NLP Transcription Factor Family AT1G20640 44.537 0.0 599