Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0049 ATGTTTCCTACATTCTTTTATTTATTTTGTTCTGTAACTCTTGTTGGTTCTGACAACCAAAACAAAGAGAGAAGTAAATCTATTAGGTTCTTTGTAAATTATAAGAAAAGGAAGAAAAATGCTTTTAAGTGTATGGATAAGGAAGTTATGGGGATTCCTTCAAGTGTGAATGGGAAATTGAAATTCCAGGAAAGTGCGGCTTTAGTTGACTTTAAGAATGGAATGGGAAATTGTCTTAAAACCCCCGGGAGCACCAGTGAAGAAGAAAGCCCTGTAGCTCCAGAAATAGAAGAAAGAGGAGGTGGGGCGGCAACTCCCACGGGGAAGATAGTAACGTCGAATCTGAAAATGTTCAGTTTGGATGAGTTGAAGAGTGCCACCAGAAACTTCAGACCGGACACAGTGCTGGGGGAGGGTGGGTTTGGAAGAGTTTTCAAGGGATGGATGGACGAGATTACCTTGAAGCCCTCCAAAGTTGGCGTTGGAATGCCTGTCGCCGTCAAGAAATCTAATTCTGATAGCCTCCAAGGCTTACAAGAATGGCAGAGTGAGGTGAAATTCTTGGGCAAGTTCTCTCATCCAAACCTGGTTAAGCTGATTGGCTACTGCTGGGAGGAAAATCAGTTCCTCCTTGTATACGAATACATGCAGAAGGGCAGCTTGGAAAACCACCTTTTCGGGAGAGGACCTGAACCCCTTGCGTGGGATATAAGGCTAAAGATAGCCATAGGAGCTGCCCGAGGCCTGGCTTTCTTGCACATGTCAGAGAAGTCTGTTATCTACAGGGACTTCAAGTCCTCCAACATTTTGCTGGATGGGGCTTTCAATGCCAAGCTTTCAGACTTTGGGCTGGCAAAGTTTGGCCCCGTCAACGGCGAATCCCACGTAACCACGCGAGTCATGGGCACATATGGTTACGCAGCGCCTGAGTATATGGCCACGGGACATCTGTATGTGAAAAGCGATGTGTATGGATTTGGGGTTGTTCTGCTGGAAATGTTAACAGGGTTACCAGCGCTAGACACAAATAGGCCCGCAGGAAAACACAGCTTGGTGGATTGGAGTAAATCATGTCTCATTGAGAAGAAGAAGGTGAAAAAGATAATGGACCTCAGGCTGGGCGAACAGTATTCCTTAGCAGCTGCATTTCAGATAGCCCAACTCATACTAAAATGTTTAGAGTCTGACCCAAAGAAACGACCGTCCATGGAAGAGGTTTTGGGAACTTTAGAGAAGGCCTATCACGTCCGATATAAACCCAAGCCCAAGAAATCCAGCGCCGTCCATCAAACTAATAAACGATTGGACCCCCACTCCACTAATAAATATAATCAGCGTCCATAG 1344 0.4554 MFPTFFYLFCSVTLVGSDNQNKERSKSIRFFVNYKKRKKNAFKCMDKEVMGIPSSVNGKLKFQESAALVDFKNGMGNCLKTPGSTSEEESPVAPEIEERGGGAATPTGKIVTSNLKMFSLDELKSATRNFRPDTVLGEGGFGRVFKGWMDEITLKPSKVGVGMPVAVKKSNSDSLQGLQEWQSEVKFLGKFSHPNLVKLIGYCWEENQFLLVYEYMQKGSLENHLFGRGPEPLAWDIRLKIAIGAARGLAFLHMSEKSVIYRDFKSSNILLDGAFNAKLSDFGLAKFGPVNGESHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLPALDTNRPAGKHSLVDWSKSCLIEKKKVKKIMDLRLGEQYSLAAAFQIAQLILKCLESDPKKRPSMEEVLGTLEKAYHVRYKPKPKKSSAVHQTNKRLDPHSTNKYNQRP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0049 447 Gene3D Phosphorylase Kinase; domain 1 103 215 - -
Glsi10g0049 447 FunFam Serine/threonine-protein kinase BIK1 102 215 - -
Glsi10g0049 447 PANTHER OS01G0588500 PROTEIN-RELATED 67 412 - -
Glsi10g0049 447 Gene3D Transferase(Phosphotransferase) domain 1 216 435 - -
Glsi10g0049 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Glsi10g0049 447 MobiDBLite consensus disorder prediction 417 447 - -
Glsi10g0049 447 ProSiteProfiles Protein kinase domain profile. 130 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0049 447 SUPERFAMILY Protein kinase-like (PK-like) 110 411 IPR011009 -
Glsi10g0049 447 CDD STKc_IRAK 136 412 - -
Glsi10g0049 447 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 216 424 - -
Glsi10g0049 447 ProSitePatterns Protein kinases ATP-binding region signature. 136 169 IPR017441 GO:0005524
Glsi10g0049 447 Pfam Protein tyrosine and serine/threonine kinase 134 408 IPR001245 GO:0004672|GO:0006468
Glsi10g0049 447 MobiDBLite consensus disorder prediction 82 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0049 Glsi-ChrGlsi10 411891 416270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0049 109 410 Glycoside Hydrolase AT3G07070 48.860 2.98e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi10g0049 PK_Tyr_Ser-Thr 1.5e-45 CL0016