Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0042 ATGGAGTGGCAGATTGAAGAGCAAGAACAGACCTCTGATGGCGTTGGAGGGTTGTACGTCAAAGTGATGACCGACGAGCAAATGGAGCTTCTCAGGAAGCAGATCTCTGTGTACTCCACCATATGCGAGCAGCTTGTGGAGATGCACAAGGCCATCACAGCTCAACAAGACCTCGCAGGACTGAGGCTGGGAAATTTATACTGTGATCCACTCATGGCATCTTCTGGACACAAGATAACTGCCAGGCAGCGCTGGACTCCAACCCCCCTTCAGCTTCAGATACTTGAGGGTATTTTTGACCAAGGCAATGGAACTCCAACCAAACAGAAGATCAAAGAGATAACCATGGAACTGGGGCAGCATGGCCAAATTTCTGAGACCAATGTCTATAATTGGTTTCAAAACAGAAGAGCTCGTTCAAAACGTAAGCAATTAGTTCCCACGCCAAATCATGTAGATTCAGAAGTAGAGACCGAAGTTGAGTCTCCAAATGAGAAAAAGACCACACCAGAAAGCATTCAAGTTCAACCCTATGAGAATCAGTCTCAGAATTCCCCACCACCACAAAGGGCCAAAGATATATACTTCCACCCTCCTGACATGGGATTTGACCAATTGATGAGCAAAATAGAAGTTGCAGGCTGCTATAGTCCTTACTTTCAAGGCGAGATATATGATATGGCTGGTTAA 690 0.458 MEWQIEEQEQTSDGVGGLYVKVMTDEQMELLRKQISVYSTICEQLVEMHKAITAQQDLAGLRLGNLYCDPLMASSGHKITARQRWTPTPLQLQILEGIFDQGNGTPTKQKIKEITMELGQHGQISETNVYNWFQNRRARSKRKQLVPTPNHVDSEVETEVESPNEKKTTPESIQVQPYENQSQNSPPPQRAKDIYFHPPDMGFDQLMSKIEVAGCYSPYFQGEIYDMAG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0042 229 CDD homeodomain 82 144 IPR001356 GO:0003677
Glsi10g0042 229 SMART HOX_1 80 147 IPR001356 GO:0003677
Glsi10g0042 229 MobiDBLite consensus disorder prediction 140 197 - -
Glsi10g0042 229 MobiDBLite consensus disorder prediction 167 189 - -
Glsi10g0042 229 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Glsi10g0042 229 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 204 IPR044559 GO:0003700
Glsi10g0042 229 SUPERFAMILY Homeodomain-like 81 144 IPR009057 -
Glsi10g0042 229 Pfam Homeodomain 82 142 IPR001356 GO:0003677
Glsi10g0042 229 Gene3D - 83 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0042 Glsi-ChrGlsi10 381859 382760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0042 18 229 Wox Gene Family AT4G35550 56.356 1.07e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi10g0042 Homeodomain 3.9e-18 CL0123