Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0016 ATGTTCTTGGATATGGAAACACTCGGACCTGGAGTTTGCCATGGGTGTTTCCGAATATCTTTACGGGGAAAAGATCTGATTGTTGCAGTTTTCCTTCTCATATCGATCATGCTCATGAATAAATCTATGGTTCTTCTGTTGGTCAAATCGTACACAATTGGCAATTCCGTGATAGAAAGAATGACTGAAGACTGTGAGCACGCTATCGGCAAAGGACGCCTTCGAGAAGCTAGAGAAGGCACCTACGGGAAGGTGTATAGGGCAATAGATAAAGCAACTGGGAAGATCGTTGCCCTTAAGAAGACTCGCCTCCACGAGGACGAAGAAGGCGTCTCTCCCACCACTCTCCGTGAGATTTCCATTTTGCGTATGCTCTCCAGGGATCCCCACGTTGTCAGGGATTTGAAGCCCCACAATCTCTTGATGGACCGTAAAACGATGATGCTTAAAATAGCTGGTCTTGGACTAGCTCGAGCATTTACCGTGCCAATTAAGAAATACACTAATGAGGTGGTGCCTGTGTTTTCTCTTTTCAGATATTAA 543 0.453 MFLDMETLGPGVCHGCFRISLRGKDLIVAVFLLISIMLMNKSMVLLLVKSYTIGNSVIERMTEDCEHAIGKGRLREAREGTYGKVYRAIDKATGKIVALKKTRLHEDEEGVSPTTLREISILRMLSRDPHVVRDLKPHNLLMDRKTMMLKIAGLGLARAFTVPIKKYTNEVVPVFSLFRY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0016 180 Pfam Protein kinase domain 79 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0016 180 Gene3D Transferase(Phosphotransferase) domain 1 136 172 - -
Glsi10g0016 180 SUPERFAMILY Protein kinase-like (PK-like) 79 172 IPR011009 -
Glsi10g0016 180 Gene3D Phosphorylase Kinase; domain 1 72 135 - -
Glsi10g0016 180 PANTHER CELL DIVISION PROTEIN KINASE 74 132 - -
Glsi10g0016 180 ProSiteProfiles Protein kinase domain profile. 71 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0016 Glsi-ChrGlsi10 230309 233801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0016 133 175 Core Cell Cycle Gene Families AT1G76540 74.419 1.99e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi10g0016 Pkinase 9.6e-09 CL0016