Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0014 ATGGATGATCTTGAAATCATGGACGATGATATAGTCGGACAAATTAATTGGGGCAATATTTATGATGAGAACTTGTTCGCCCCACTAATTGCTGATACGCCTTTGTCTGATCCGTCCCCTGATTCGTATTTTGTCGAGATTGAAAACTTGTTGATGGAGGACAGCCATCGCCTCGTTCCCGAAGCCCCCTCCGAATCTGGCTCTAAGGAGTATTATGATAAGTTTTTGGCCGAAATACTCGTAGGTGAGGGAGAGGACGATTCAAATCCCTCCGGTCAAGATGTTATTAATGCTGGTTTGGGCAAGGACAAAGTCGATGCAACTGCCAATGATCCCATCTCCAAGAAGCGAACAAGGCAAATGAGAAATAGGGATGCTGCAGCAAAATCCAGAGAAAGGAAAAAGATGCATGTAAAAGATCTTGAGATGAAAACCAGGTATCTTGAGGGGGAATGCCGAAGACTGGGGTATTTGCTCCACTGCTGCTATGCTGAGAATCATGCTTTACGTCTTTGTTTACAATCGAGCAGTGCATTTGGTGCTTCTATGACCAAGCTGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGTTTCCCTGCTATGGTTTGTGGGCATCATCTGCCAACTGAGTCTGCCCCTGTTGCCCTGGTTAATTCTGGAAGTAGTTTCACTGGAAAACGTGGAACAGAAAGGCCCAAGAGGGGTGGCTCAAGAAGGAACAAGAAATAAGATTTTGGCGTATTTTGTGTTGCAGTCGTTTGTAAAGAGTAGAAGATTCCGGGCCTCGAAAACTCGGATGAAAATGAATTTTCTTGTAGTCTAA 828 0.4505 MDDLEIMDDDIVGQINWGNIYDENLFAPLIADTPLSDPSPDSYFVEIENLLMEDSHRLVPEAPSESGSKEYYDKFLAEILVGEGEDDSNPSGQDVINAGLGKDKVDATANDPISKKRTRQMRNRDAAAKSRERKKMHVKDLEMKTRYLEGECRRLGYLLHCCYAENHALRLCLQSSSAFGASMTKLESAVLLLESLLLVSLLWFVGIICQLSLPLLPWLILEVVSLENVEQKGPRGVAQEGTRNKILAYFVLQSFVKSRRFRASKTRMKMNFLVV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0014 275 MobiDBLite consensus disorder prediction 106 135 - -
Glsi10g0014 275 SUPERFAMILY Leucine zipper domain 115 171 IPR046347 GO:0003700|GO:0006355
Glsi10g0014 275 Pfam Basic region leucine zipper 115 155 IPR004827 GO:0003700|GO:0006355
Glsi10g0014 275 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 89 236 - -
Glsi10g0014 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 155 IPR004827 GO:0003700|GO:0006355
Glsi10g0014 275 MobiDBLite consensus disorder prediction 108 135 - -
Glsi10g0014 275 Gene3D - 114 178 - -
Glsi10g0014 275 CDD bZIP_HY5-like 116 167 - -
Glsi10g0014 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 133 IPR004827 GO:0003700|GO:0006355
Glsi10g0014 275 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0014 39 190 bZIP Transcription Factor Family AT1G42990 36.508 4.28e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0014 bZIP_2 1.1e-08 CL0018