Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0011 ATGCTGCTACAAACAAGAACGTTGGGCAGAGTATCGTGGTGGATCTTGAGAACGAAAGCTCCCTCGAGCCAAGAGGGAGAATTGATAGGCAAGAACAATTATGAGGACGTGGGCGTTGAAACACCATTTGCAAAGGGAAATTGGGAGGTGGAGTTTGACAATTGCTCCTTTATGACTACACTCATAAAATATTTACTCAGAATTTTCCTACTGATCGATATGAAGAACTATTCCATCAAAAACAAGTTTGTGGCCATCGGTACCCAAATCTATCAAGTTCATTCCCTTCCACCTGCAGCGTCCTCCACCTTACCTTCAAATACAAGTTGTTACTCTGTTTTACCAAATCATCAACAACATGCAGGATATGGAGATCCAGCACGGGACTCAGGGGCCATGGTTTCGCTTCATTCCCAAGTTTCTCCTTCCTCCTGTTTCCTCAGCGGCTCCTTCTCTTTCTTTTTGGCCCCAAAATCGAGAAACAACTTGATAATTAAGCTTAAGCACCCTTCTGTCTGCAAAGCCTCATGGCAAGAGCTTGCCGGAGTGTTACTGTTTTCGGCGATTCCTTTCACTGCCGTTAAAGCTATAGCTAATAGTCCACTAGGGCAGTCGCTTCAGAGGAGAATGCAGGAGAGAAAGAAATTTGCTCTGGACAACTCCTCCAAATTCAAGGCGTTAGCCCAGAAGGCCAGAAAAGAGAGCTATTGGTATGGAGAATACCGACCTCGTTGGCTTGGTCCTATTCCATATGACTATCCAGCATATCTTACTGGGGAACTTCCTGGGGATTACGGCTTTGACATTGCAGGGCTTGGCAATGATCCTGTAGCTTTGCAGAAATACTTCAACTTTGAAATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTTGGTGCACTAGTTCCTGAAATATTAGACCTATTTGGGGCCTTTCACTTTGTTGAACCCATCTGGTGGCGAGTTGGCTATTCAAAGCTCAAGGGAGATACTCTAGACTACCTTGGCATCCCAGGACTTCACTTAGCTGGAAGCCAAGGAGTTGTTGTAATTGCCATTTGCCAAGCACTGCTCATGGTTGGACCAGAATATGCTAGATATTGTGGGATTGAAGCATTGGAGCCTCTAGGAATATATCTGCCTGGTGATATAAATTATCCAGGAGGAGCATTATTTGATCCCCTGAATCTGTCCAAAGATCCTGAAGCTTTTGAGGAGCTAAAGGTGAAAGAAATAAAAAATGGACGCCTAGCAATGATTGCCTGGTTAGGTTTTTACACTCAAGCAGCTCTGACGGGTAAAGGTCCCTTGCAGAACCTTCTTGATCACATCTCCGATCCTCTCCACAATAACTTGCTGTGCACGCTGAACTTCATGAAAGTCGTTACGTGA 1392 0.449 MLLQTRTLGRVSWWILRTKAPSSQEGELIGKNNYEDVGVETPFAKGNWEVEFDNCSFMTTLIKYLLRIFLLIDMKNYSIKNKFVAIGTQIYQVHSLPPAASSTLPSNTSCYSVLPNHQQHAGYGDPARDSGAMVSLHSQVSPSSCFLSGSFSFFLAPKSRNNLIIKLKHPSVCKASWQELAGVLLFSAIPFTAVKAIANSPLGQSLQRRMQERKKFALDNSSKFKALAQKARKESYWYGEYRPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGNDPVALQKYFNFEILHARWAMLASVGALVPEILDLFGAFHFVEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMIAWLGFYTQAALTGKGPLQNLLDHISDPLHNNLLCTLNFMKVVT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0011 463 Gene3D Chlorophyll a/b binding protein domain 244 455 - -
Glsi10g0011 463 SUPERFAMILY Chlorophyll a-b binding protein 236 456 - -
Glsi10g0011 463 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 209 454 IPR001344 GO:0009765|GO:0016020
Glsi10g0011 463 FunFam Chlorophyll a-b binding protein, chloroplastic 244 456 - -
Glsi10g0011 463 Pfam Chlorophyll A-B binding protein 254 429 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0011 Glsi-ChrGlsi10 175258 187529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0011 155 457 Chloroplast and Mitochondria Gene Families AT1G76570 76.898 5.12e-180 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0011 10 175258 187529 Glsi10g0011 10 175258 187529 ECH